RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IPO4Q8TEX9 1081 aaKnown RBP4.87□□□□□ -1.63
CLK1-203ENST00000409769 MARK4Q96L34 752 aa4.87□□□□□ -1.63
CLK1-203ENST00000409769 CHMP4BQ9H444 224 aaKnown RBP4.87□□□□□ -1.63
CLK1-203ENST00000409769 PLCB1Q9NQ66 1216 aa4.87□□□□□ -1.63
CLK1-203ENST00000409769 MTMR4Q9NYA4 1195 aa4.87□□□□□ -1.63
CLK1-203ENST00000409769 NARFQ9UHQ1 456 aa4.87□□□□□ -1.63
CLK1-203ENST00000409769 CDC23Q9UJX2 597 aa4.87□□□□□ -1.63
CLK1-203ENST00000409769 UBE2J1Q9Y385 318 aaPredicted RBP4.87□□□□□ -1.63
CLK1-203ENST00000409769 SIRT4Q9Y6E7 314 aaPredicted RBP4.87□□□□□ -1.63
CLK1-203ENST00000409769 CCDC187A0A096LP49 1063 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 PNMA6EA0A0J9YXQ4 647 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 GRM8O00222 908 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 POLE2P56282 527 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 WDR5P61964 334 aaKnown RBP4.86□□□□□ -1.63
CLK1-203ENST00000409769 HSF1Q00613 529 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 NEXNQ0ZGT2 675 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 GCKRQ14397 625 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 SMIM5Q71RC9 77 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 GATAD2AQ86YP4 633 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 LAS2Q8IYD9 372 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 NRSN1Q8IZ57 195 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 ZNF527Q8NB42 609 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 CCDC191Q8NCU4 936 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 WDR60Q8WVS4 1066 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 PMM1Q92871 262 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 GATA5Q9BWX5 397 aaPredicted RBP4.86□□□□□ -1.63
CLK1-203ENST00000409769 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 CDCP1Q9H5V8 836 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 UBN2Q6ZU65 1347 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 CDHR2Q9BYE9 1310 aa4.86□□□□□ -1.63
CLK1-203ENST00000409769 USP42Q9H9J4 1324 aaKnown RBP4.86□□□□□ -1.63
CLK1-203ENST00000409769 TTC34A8MYJ7 566 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 M0QZQ0 153 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 SYT5O00445 386 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 PIP5K1BO14986 540 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 SKAP2O75563 359 aaPredicted RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 SGPL1O95470 568 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 IGHDP01880 384 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 PRF1P14222 555 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 HOXD12P35452 270 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 ALDH18A1P54886 795 aaKnown RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 ID2Q02363 134 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 SLC14A1Q13336 389 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 MTX1Q13505 466 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 RABL6Q3YEC7 729 aaPredicted RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 ZACNQ401N2 412 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 DEFB132Q7Z7B7 95 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 TRABD2AQ86V40 505 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 RPAP2Q8IXW5 612 aaPredicted RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 ANKRD44Q8N8A2 993 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 BCAS4Q8TDM0 211 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 MAP4K1Q92918 833 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 ZNF845Q96IR2 970 aaPredicted RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 LYZL4Q96KX0 146 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 SIGLEC11Q96RL6 698 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 PRPF18Q99633 342 aaKnown RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 CWC25Q9NXE8 425 aaPredicted RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 SRP68Q9UHB9 627 aaKnown RBP4.85□□□□□ -1.63
CLK1-203ENST00000409769 TAGLN3Q9UI15 199 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 ZMYM2Q9UBW7 1377 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 ANKRD31Q8N7Z5 1873 aa4.85□□□□□ -1.63
CLK1-203ENST00000409769 A0A1B0GUL6 1792 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 TNRC6CQ9HCJ0 1690 aaKnown RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 LRP5O75197 1615 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 LOC105369274A0A096LPK9 316 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 LOC102723532A0A0G2JNH3 316 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 PCCAP05165 728 aaPredicted RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 UBTFL1P0CB47 393 aaPredicted RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 GYS1P13807 737 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 PDIA3P30101 505 aaKnown RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 THBS4P35443 961 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 LINC00205P59089 165 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 CFHR1Q03591 330 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 ICA1Q05084 483 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 GALNT1Q10472 559 aaPredicted RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 FOXO1Q12778 655 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 BFSP2Q13515 415 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 GRM4Q14833 912 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 PUM3Q15397 648 aaKnown RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 SEC23BQ15437 767 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 CNGA3Q16281 694 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 SLC15A2Q16348 729 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 PFKFB3Q16875 520 aaPredicted RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 FAM110CQ1W6H9 321 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 PARP10Q53GL7 1025 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 SUSD4Q5VX71 490 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 TBC1D9BQ66K14 1250 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 SMC5Q8IY18 1101 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 OR4N4Q8N0Y3 316 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 ASB12Q8WXK4 309 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 NPIPB3Q92617 1050 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK1-203ENST00000409769 FAR2Q96K12 515 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 EIF3CQ99613 913 aaKnown RBP4.84□□□□□ -1.63
CLK1-203ENST00000409769 SENP7Q9BQF6 1050 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 KATNAL1Q9BW62 490 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 NUAK2Q9H093 628 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 OBP2BQ9NPH6 170 aa4.84□□□□□ -1.63
CLK1-203ENST00000409769 POT1Q9NUX5 634 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms