RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CABIN1Q9Y6J0 2220 aa15.1■□□□□ 0.01
CBX3-203ENST00000409747 ILVBLA1L0T0 632 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 SRGAP2O75044 1071 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CDK4P11802 303 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CHRNA3P32297 505 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CDR2Q01850 454 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 ARL13BQ3SXY8 428 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CDKAL1Q5VV42 579 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 NEK5Q6P3R8 708 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 TRIM72Q6ZMU5 477 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 OR2A12Q8NGT7 310 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 PPP1R16AQ96I34 528 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 VPS16Q9H269 839 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CCDC86Q9H6F5 360 aaKnown RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 METTL5Q9NRN9 209 aaKnown RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 MPP6Q9NZW5 540 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 NOCTQ9UK39 431 aaKnown RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 SNX10Q9Y5X0 201 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 KNL1Q8NG31 2342 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 PRAMEF26H0Y7S4 382 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 PLK4O00444 970 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 KPNA3O00505 521 aaPredicted RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 SNAP91O60641 907 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 RNGTTO60942 597 aaKnown RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 GFPT2O94808 682 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 MT-CO1P00395 513 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 EPHA8P29322 1005 aaPredicted RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 ETFBP38117 255 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 SLC20A2Q08357 652 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 STAT4Q14765 748 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 KRT31Q15323 416 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 POM121L1PQ3SYA9 428 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 C2CD6Q53TS8 623 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 C22orf39Q6P5X5 142 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 FAM131BQ86XD5 332 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 SAP25Q8TEE9 199 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 CEP44Q9C0F1 390 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 RETREG1Q9H6L5 497 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 FAM207AQ9NSI2 230 aaPredicted RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 LMBRD1Q9NUN5 540 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 ARHGAP20Q9P2F6 1191 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 PPARGC1AQ9UBK2 798 aaKnown RBP15.09■□□□□ 0.01
CBX3-203ENST00000409747 PCDHGA1Q9Y5H4 931 aa15.09■□□□□ 0.01
CBX3-203ENST00000409747 A0A0D9SEW6 157 aa15.08■□□□□ 0
CBX3-203ENST00000409747 WNT9AO14904 365 aa15.08■□□□□ 0
CBX3-203ENST00000409747 ENDOD1O94919 500 aa15.08■□□□□ 0
CBX3-203ENST00000409747 CYP1A1P04798 512 aaPredicted RBP15.08■□□□□ 0
CBX3-203ENST00000409747 MMP8P22894 467 aa15.08■□□□□ 0
CBX3-203ENST00000409747 RRM1P23921 792 aa15.08■□□□□ 0
CBX3-203ENST00000409747 MAT2AP31153 395 aaKnown RBP15.08■□□□□ 0
CBX3-203ENST00000409747 SDC4P31431 198 aa15.08■□□□□ 0
CBX3-203ENST00000409747 SOX5P35711 763 aa15.08■□□□□ 0
CBX3-203ENST00000409747 RXRGP48443 463 aa15.08■□□□□ 0
CBX3-203ENST00000409747 POLR2FP61218 127 aaKnown RBP15.08■□□□□ 0
CBX3-203ENST00000409747 PIP5KL1Q5T9C9 394 aa15.08■□□□□ 0
CBX3-203ENST00000409747 GATAD2AQ86YP4 633 aa15.08■□□□□ 0
CBX3-203ENST00000409747 SLC20A1Q8WUM9 679 aa15.08■□□□□ 0
CBX3-203ENST00000409747 GBP4Q96PP9 640 aa15.08■□□□□ 0
CBX3-203ENST00000409747 ATP13A1Q9HD20 1204 aa15.08■□□□□ 0
CBX3-203ENST00000409747 TMPRSS4Q9NRS4 437 aa15.08■□□□□ 0
CBX3-203ENST00000409747 IL36AQ9UHA7 158 aa15.08■□□□□ 0
CBX3-203ENST00000409747 DOCK4Q8N1I0 1966 aa15.07■□□□□ 0
CBX3-203ENST00000409747 PLXNB3Q9ULL4 1909 aa15.07■□□□□ 0
CBX3-203ENST00000409747 CXorf51AA0A1B0GTR3 108 aa15.07■□□□□ 0
CBX3-203ENST00000409747 K7ERQ8 282 aa15.07■□□□□ 0
CBX3-203ENST00000409747 CBX4O00257 560 aa15.07■□□□□ 0
CBX3-203ENST00000409747 ENC1O14682 589 aa15.07■□□□□ 0
CBX3-203ENST00000409747 LDOC1O95751 146 aaPredicted RBP15.07■□□□□ 0
CBX3-203ENST00000409747 CAPNS1P04632 268 aa15.07■□□□□ 0
CBX3-203ENST00000409747 CTSLP07711 333 aa15.07■□□□□ 0
CBX3-203ENST00000409747 C1SP09871 688 aa15.07■□□□□ 0
CBX3-203ENST00000409747 STAT1P42224 750 aa15.07■□□□□ 0
CBX3-203ENST00000409747 SERPINH1P50454 418 aaKnown RBP15.07■□□□□ 0
CBX3-203ENST00000409747 JAM2P57087 298 aa15.07■□□□□ 0
CBX3-203ENST00000409747 ATP11AP98196 1134 aa15.07■□□□□ 0
CBX3-203ENST00000409747 NRG1Q02297 640 aaPredicted RBP15.07■□□□□ 0
CBX3-203ENST00000409747 SHBQ15464 509 aa15.07■□□□□ 0
CBX3-203ENST00000409747 SMAD1Q15797 465 aaKnown RBP15.07■□□□□ 0
CBX3-203ENST00000409747 PRAMEF14Q5SWL7 426 aa15.07■□□□□ 0
CBX3-203ENST00000409747 TRNP1Q6NT89 227 aa15.07■□□□□ 0
CBX3-203ENST00000409747 LINGO4Q6UY18 593 aa15.07■□□□□ 0
CBX3-203ENST00000409747 RBM43Q6ZSC3 357 aaKnown RBP15.07■□□□□ 0
CBX3-203ENST00000409747 PCDH20Q8N6Y1 951 aaKnown RBP15.07■□□□□ 0
CBX3-203ENST00000409747 CNDP2Q96KP4 475 aaKnown RBP15.07■□□□□ 0
CBX3-203ENST00000409747 SPON2Q9BUD6 331 aa15.07■□□□□ 0
CBX3-203ENST00000409747 FAM208BQ5VWN6 2430 aa15.07■□□□□ 0
CBX3-203ENST00000409747 FAM170AA1A519 330 aa15.06■□□□□ 0
CBX3-203ENST00000409747 NSFP46459 744 aaKnown RBP15.06■□□□□ 0
CBX3-203ENST00000409747 GEMIN4P57678 1058 aaKnown RBP15.06■□□□□ 0
CBX3-203ENST00000409747 TAS2R38P59533 333 aa15.06■□□□□ 0
CBX3-203ENST00000409747 FMO1Q01740 532 aa15.06■□□□□ 0
CBX3-203ENST00000409747 GNA12Q03113 381 aa15.06■□□□□ 0
CBX3-203ENST00000409747 SYCP1Q15431 976 aa15.06■□□□□ 0
CBX3-203ENST00000409747 CCDC157Q569K6 752 aa15.06■□□□□ 0
CBX3-203ENST00000409747 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
CBX3-203ENST00000409747 ERN2Q76MJ5 926 aaKnown RBP15.06■□□□□ 0
CBX3-203ENST00000409747 STRADAQ7RTN6 431 aa15.06■□□□□ 0
CBX3-203ENST00000409747 EMC1Q8N766 993 aa15.06■□□□□ 0
CBX3-203ENST00000409747 OR7D4Q8NG98 312 aa15.06■□□□□ 0
CBX3-203ENST00000409747 GRIN3AQ8TCU5 1115 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms