RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ADGRE3Q9BY15 652 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 NINJ2Q9NZG7 142 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 DTLQ9NZJ0 730 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 IRAK2O43187 625 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SKAP2O75563 359 aaPredicted RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 TTC4O95801 387 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 IGSF6O95976 241 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 HSPA14Q0VDF9 509 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 MORF4L2Q15014 288 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 NAPRTQ6XQN6 538 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 ARHGAP36Q6ZRI8 547 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 ZCCHC23Q6ZST2 131 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 LINC00523Q86TU6 105 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNX13-202ENST00000409604 KXD1Q9BQD3 176 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 OPHN1O60890 802 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 FAM155BO75949 473 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SASH3O75995 380 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 HLA-EP13747 358 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 TSPAN8P19075 237 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 INCA1Q0VD86 236 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SHHQ15465 462 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 RBBP7Q16576 425 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 ZNF284Q2VY69 593 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 CRLF3Q8IUI8 442 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 PNPLA1Q8N8W4 532 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 HJURPQ8NCD3 748 aaPredicted RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 NEUROG2Q9H2A3 272 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 NPHS2Q9NP85 383 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 CHRAC1Q9NRG0 131 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 BAIAP2L1Q9UHR4 511 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SYNDIG1LA6NDD5 238 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 NCAM2O15394 837 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 SUN1O94901 812 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 GEMIN4P57678 1058 aaKnown RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 LBRQ14739 615 aaKnown RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 ALFQ53S48 1182 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 UNC5AQ6ZN44 842 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 RFWD2Q8NHY2 731 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 ZSCAN18Q8TBC5 510 aaPredicted RBP11.59□□□□□ -0.55
SNX13-202ENST00000409604 TBL1YQ9BQ87 522 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 FBXW11Q9UKB1 542 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 CABIN1Q9Y6J0 2220 aa11.59□□□□□ -0.55
SNX13-202ENST00000409604 A0A0D9SEW6 157 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 SUPT7LO94864 414 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 GLP2RO95838 553 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 RHOP08100 348 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 TAC1P20366 129 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 NR2C2P49116 596 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 BTKQ06187 659 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 SLC10A7Q0GE19 358 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 UBXN2BQ14CS0 331 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 SPDYAQ5MJ70 313 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 FAM151BQ6UXP7 276 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 KCNMB4Q86W47 210 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.55
SNX13-202ENST00000409604 LZTR1Q8N653 840 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 CCDC197Q8NCU1 140 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 TOP1MTQ969P6 601 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.55
SNX13-202ENST00000409604 FGFR1OP2Q9NVK5 253 aa11.58□□□□□ -0.55
SNX13-202ENST00000409604 RUVBL2Q9Y230 463 aaKnown RBP11.58□□□□□ -0.55
SNX13-202ENST00000409604 CD72P21854 359 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 L1CAMP32004 1257 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 BMPR1AP36894 532 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 NME5P56597 212 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 ERVFC1P60507 584 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 GNA12Q03113 381 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 LY6G5CQ5SRR4 150 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 MRNIPQ6NTE8 343 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CHST9Q7L1S5 443 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 TRMT11Q7Z4G4 463 aaKnown RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 TMC3Q7Z5M5 1100 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 HDAC10Q969S8 669 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 MFSD3Q96ES6 412 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 ZNF333Q96JL9 665 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CLPBQ9H078 707 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 GPAMQ9HCL2 828 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 SAGE1Q9NXZ1 904 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX13-202ENST00000409604 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 SLC17A6Q9P2U8 582 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 FBXO10Q9UK96 956 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 ACTL7AQ9Y615 435 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 H3BQF6 201 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 COCHO43405 550 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 HIST1H2AGP0C0S8 130 aaPredicted RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 HAPLN1P10915 354 aaPredicted RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 HIST1H2ADP20671 130 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 MAP4P27816 1152 aaKnown RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 SGCGQ13326 291 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 RBBP5Q15291 538 aaKnown RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 LRRC38Q5VT99 294 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms