RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FAM47DPA6NHR8 397 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 YKT6O15498 198 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 FLRT2O43155 660 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 LATO43561 262 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 PCDHGA12O60330 932 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 SRCP12931 536 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 RHOQP17081 205 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 RECQLP46063 649 aaPredicted RBP14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 PSMD8P48556 350 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 ADPRHP54922 357 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 C21orf59P57076 290 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 ANO6Q4KMQ2 910 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 FAM131BQ86XD5 332 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 NAXDQ8IW45 347 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 AOPEPQ8N6M6 819 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 OR52K2Q8NGK3 314 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 ISG20Q96AZ6 181 aaKnown RBP14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 PCDHB18PQ96TA0 734 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 C11orf70Q9BRQ4 267 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 ORAI3Q9BRQ5 295 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 TMEM63CQ9P1W3 806 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 VPS51Q9UID3 782 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 WASF3Q9UPY6 502 aa14.88□□□□□ -0.03
NIF3L1-205ENST00000409588 PLRG1O43660 514 aaKnown RBP14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 SH3BP5O60239 455 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PTMSP20962 102 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 GPD1P21695 349 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 CD38P28907 300 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 CHRNA3P32297 505 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 RFC1P35251 1148 aaPredicted RBP14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 DRD3P35462 400 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 CTSKP43235 329 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ZNF165P49910 485 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 IRAK1P51617 712 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ZNF143P52747 638 aaPredicted RBP14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 GNA12Q03113 381 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 SCAPQ12770 1279 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 INAVAQ3KP66 663 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ACAD10Q6JQN1 1059 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 TRNP1Q6NT89 227 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 WDR59Q6PJI9 974 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 IRF2BP2Q7Z5L9 587 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 SLFN11Q7Z7L1 901 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 IQCHQ86VS3 1027 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ZSCAN30Q86W11 494 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 TRIM69Q86WT6 500 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PCDH20Q8N6Y1 951 aaKnown RBP14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 EMC1Q8N766 993 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 OR2A12Q8NGT7 310 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 FAM174AQ8TBP5 190 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PIP4K2CQ8TBX8 421 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PPP1R16AQ96I34 528 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 LRIG1Q96JA1 1093 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PSMB7Q99436 277 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 MAGEH1Q9H213 219 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ERVMER34-1Q9H9K5 563 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 PREBQ9HCU5 417 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 DYRK4Q9NR20 520 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 MPP6Q9NZW5 540 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ZNF212Q9UDV6 495 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 SERGEFQ9UGK8 458 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 APOBEC2Q9Y235 224 aaKnown RBP14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 NEUROG3Q9Y4Z2 214 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 ACACBO00763 2458 aa14.87□□□□□ -0.03
NIF3L1-205ENST00000409588 A0A0D9SEW6 157 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TMEM8BA6NDV4 472 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 EIF3CLB5ME19 914 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 CBX4O00257 560 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 CBFA2T3O75081 653 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 PLEKP08567 350 aaPredicted RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 GZMAP12544 262 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 ATP1A3P13637 1013 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 L1CAMP32004 1257 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 HTR7P34969 479 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 GGCXP38435 758 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TPM4P67936 248 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 BNC1Q01954 994 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 FOXC1Q12948 553 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 Q6ZVU0 165 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 MON1BQ7L1V2 547 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TFAP2DQ7Z6R9 452 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 OXR1Q8N573 874 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 MFSD2AQ8NA29 543 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 OR2I1PQ8NGU4 316 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 SETD7Q8WTS6 366 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 FAM172AQ8WUF8 416 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 EIF3CQ99613 913 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 NCAPGQ9BPX3 1015 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 SPON2Q9BUD6 331 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 HDAC8Q9BY41 377 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 ATP13A1Q9HD20 1204 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 SEPT11Q9NVA2 429 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TMEM248Q9NWD8 314 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 AIPL1Q9NZN9 384 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms