RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SERINC3Q13530 473 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 NOMO1Q15155 1222 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 PLEKHG6Q3KR16 790 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ADAT2Q7Z6V5 191 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 KIAA0907Q7Z7F0 614 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ATPAF2Q8N5M1 289 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 DCAF4L2Q8NA75 395 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ACTL9Q8TC94 416 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 NELL1Q92832 810 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ARHGEF2Q92974 986 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ACDQ96AP0 544 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 HAUS1Q96CS2 278 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 ATP13A1Q9HD20 1204 aa16.88■□□□□ 0.29
TSPAN4-208ENST00000409531 A0A0D9SEW6 157 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 CXorf51AA0A1B0GTR3 108 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 TCRBV7S2A1N4TA0A589 114 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 ZSCAN5CA6NGD5 496 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 HACD1B0YJ81 288 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 KRIT1O00522 736 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 PECAM1P16284 738 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 CD70P32970 193 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 PAPOLAP51003 745 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 SULT2A1Q06520 285 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 SLC10A2Q12908 348 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 EIF4HQ15056 248 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 E2F5Q15329 346 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 WHAMMP3Q1A5X7 153 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 ZC3H14Q6PJT7 736 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 NPNTQ6UXI9 565 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 PHTF2Q8N3S3 785 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 TERB1Q8NA31 727 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 OR7D4Q8NG98 312 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 OR52K2Q8NGK3 314 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 RPLP0P6Q8NHW5 317 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 HDAC11Q96DB2 347 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 LMLNQ96KR4 655 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 OLFM3Q96PB7 478 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 SPON2Q9BUD6 331 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 ACE2Q9BYF1 805 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 SEMA4AQ9H3S1 761 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 C2orf42Q9NWW7 574 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 ZSCAN32Q9NX65 697 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 OR51B4Q9Y5P0 310 aa16.87■□□□□ 0.29
TSPAN4-208ENST00000409531 ATG2BQ96BY7 2078 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 TIMM44O43615 452 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 KDELR3O43731 214 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 TDGF1P13385 188 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 POLR2EP19388 210 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 CCNCP24863 283 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 HOXA6P31267 233 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 ACVRL1P37023 503 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 GEMIN4P57678 1058 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 EIF3EP60228 445 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 KDSRQ06136 332 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 CCNG2Q16589 344 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 SYT13Q7L8C5 426 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 ZBTB44Q8NCP5 570 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 CCNYQ8ND76 341 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 USP33Q8TEY7 942 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 TFB1MQ8WVM0 346 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 ALG14Q96F25 216 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 TSGA13Q96PP4 275 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 SP110Q9HB58 689 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 IPO11Q9UI26 975 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 PCDHGA2Q9Y5H1 932 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 MRFAP1Q9Y605 127 aa16.86■□□□□ 0.29
TSPAN4-208ENST00000409531 MYO18AQ92614 2054 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 H7C0C1 242 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 K7ESF4 209 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 CBX4O00257 560 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 TRIM24O15164 1050 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 MTSS1O43312 755 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 ASLP04424 464 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 ATP5BP06576 529 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 RBP3P10745 1247 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 ATP5OP48047 213 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 IL10RBQ08334 325 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 SIX1Q15475 284 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 FUT11Q495W5 492 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 RETSATQ6NUM9 610 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 DRICH1Q6PGQ1 229 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 ZC3H18Q86VM9 953 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 SFTPA1Q8IWL2 248 aa16.85■□□□□ 0.29
TSPAN4-208ENST00000409531 APCDD1Q8J025 514 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms