RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ACBD5Q5T8D3 534 aaPredicted RBP21.07■□□□□ 0.96
USP39-203ENST00000409470 FYB2Q5VWT5 728 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 RNF43Q68DV7 783 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 ARMC2Q8NEN0 867 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 DIS3LQ8TF46 1054 aaKnown RBP21.07■□□□□ 0.96
USP39-203ENST00000409470 PTPRN2Q92932 1015 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 CDK5RAP1Q96SZ6 601 aaKnown RBP21.07■□□□□ 0.96
USP39-203ENST00000409470 FSD1LQ9BXM9 530 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 SP110Q9HB58 689 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 H0YHG0 523 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 TPP1O14773 563 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 PMPCBO75439 489 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 BGNP21810 368 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 SCTRP47872 440 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 RENBPP51606 427 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 FAM133BQ5BKY9 247 aaKnown RBP21.07■□□□□ 0.96
USP39-203ENST00000409470 GRTP1Q5TC63 336 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 FAM117BQ6P1L5 589 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 ACMSDQ8TDX5 336 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 CRISPLD2Q9H0B8 497 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 RASSF4Q9H2L5 321 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 C20orf96Q9NUD7 363 aaPredicted RBP21.07■□□□□ 0.96
USP39-203ENST00000409470 DNMT3LQ9UJW3 386 aa21.07■□□□□ 0.96
USP39-203ENST00000409470 DRGXA6NNA5 263 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 J3KR12 359 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 ATP5C1P36542 298 aaKnown RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 MTA1Q13330 715 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 HNRNPDQ14103 355 aaKnown RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 HSP90AA5PQ58FG0 334 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 STRA8Q7Z7C7 330 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 KCNMB4Q86W47 210 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 CIR1Q86X95 450 aaPredicted RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 RNF168Q8IYW5 571 aaPredicted RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 CNPY4Q8N129 248 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 PABPC5Q96DU9 382 aaKnown RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 RMDN2Q96LZ7 410 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 CEP295NLQ96MC4 621 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 AFF4Q9UHB7 1163 aaKnown RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 HBS1LQ9Y450 684 aaKnown RBP21.06■□□□□ 0.96
USP39-203ENST00000409470 DOCK4Q8N1I0 1966 aa21.06■□□□□ 0.96
USP39-203ENST00000409470 ALDOAP04075 364 aaKnown RBP21.05■□□□□ 0.96
USP39-203ENST00000409470 NMBRP28336 390 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 KCNQ1P51787 676 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 ITKQ08881 620 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 C1orf53Q5VUE5 145 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 PDZD8Q8NEN9 1154 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 NSMCE1Q8WV22 266 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 AGAP2Q99490 1192 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 CLSTN3Q9BQT9 956 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 TSSK1BQ9BXA7 367 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 ENTPD7Q9NQZ7 604 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 HAUS2Q9NVX0 235 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 CCDC78A2IDD5 438 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 RAMP2O60895 175 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 TROVE2P10155 538 aaKnown RBP eCLIP21.05■□□□□ 0.96
USP39-203ENST00000409470 TACR2P21452 398 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 POLD3Q15054 466 aaPredicted RBP21.05■□□□□ 0.96
USP39-203ENST00000409470 PCID2Q5JVF3 399 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 TEDDM1Q5T9Z0 273 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 MARC1Q5VT66 337 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 NADSYN1Q6IA69 706 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 ATP2A3Q93084 1043 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 TMEM169Q96HH4 297 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 ZNF558Q96NG5 402 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 KIFC1Q9BW19 673 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 NT5MQ9NPB1 228 aa21.05■□□□□ 0.96
USP39-203ENST00000409470 HGSO14964 777 aaPredicted RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 UBOX5O94941 541 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 SEC24AO95486 1093 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 PEX11BO96011 259 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 SOD2P04179 222 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 OR1E1P30953 314 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 SPRP35270 261 aaPredicted RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 POU6F1Q14863 301 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 KDELC2Q7Z4H8 507 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 TMCO2Q7Z6W1 182 aaPredicted RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 TRIM42Q8IWZ5 723 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 GBP7Q8N8V2 638 aaPredicted RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 TOP1MTQ969P6 601 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 PSMG2Q969U7 264 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 KLHL5Q96PQ7 755 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 RBBP8Q99708 897 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 CYP4F11Q9HBI6 524 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 RXFP1Q9HBX9 757 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 NPHS2Q9NP85 383 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 IARS2Q9NSE4 1012 aaKnown RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 USH1CQ9Y6N9 552 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 F5H5T6 163 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 GSTA1P08263 222 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 CLTBP09497 229 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 TYK2P29597 1187 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 RFC2P35250 354 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 ADRA1AP35348 466 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 OVGP1Q12889 678 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 MPP3Q13368 585 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 TAF12Q16514 161 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 PCSK7Q16549 785 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 DENND5AQ6IQ26 1287 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 PKN3Q6P5Z2 889 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 LGI2Q8N0V4 545 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms