RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ARL10Q8N8L6 244 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TUBGCP5Q96RT8 1024 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 FRMD8Q9BZ67 464 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 PPP2R3BQ9Y5P8 575 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 ACTL7AQ9Y615 435 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 A0A0A0MRY4 1105 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 IGKV6-21A0A0C4DH24 114 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 PEX1O43933 1283 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 LRIG2O94898 1065 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 MX2P20592 715 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 NMBRP28336 390 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 NUDT2P50583 147 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 PDK1Q15118 436 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 C10orf120Q5SQS8 335 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 FAM35AQ86V20 835 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 OR6K2Q8NGY2 324 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 WNT8BQ93098 351 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 RMDN1Q96DB5 314 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SPATA13Q96N96 652 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 EPAS1Q99814 870 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 BRD8Q9H0E9 1235 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 SLC2A6Q9UGQ3 507 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 hCG_2014768A0A024R1R8 64 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CAPN14A8MX76 684 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 PLIN3O60664 434 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 GPC4O75487 556 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 ZFXP17010 805 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 MATKP42679 507 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 FLT3LGP49771 235 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TBL3Q12788 808 aaKnown RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TEDDM1Q5T9Z0 273 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF470Q6ECI4 717 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 OVOS1Q6IE37 1185 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 B4GALNT2Q8NHY0 566 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 PPWD1Q96BP3 646 aaKnown RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 CCDC106Q9BWC9 280 aa13.62□□□□□ -0.23
COL6A2-204ENST00000409416 MMADHCQ9H3L0 296 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-204ENST00000409416 TADA2AO75478 443 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 SERPINE1P05121 402 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 RAG1P15918 1043 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 FGFR3P22607 806 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 GRIK3Q13003 919 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 CDC16Q13042 620 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 LRRC23Q53EV4 343 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 MFSD4BQ5TF39 518 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 LRRC39Q96DD0 335 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 RPRD1AQ96P16 312 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 SMIM14Q96QK8 99 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 SNX15Q9NRS6 342 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 TMEM30AQ9NV96 361 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 RPL26L1Q9UNX3 145 aaKnown RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 KLF11O14901 512 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 GJB3O75712 270 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 MPSTP25325 297 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 PEX2P28328 305 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 IDH3AP50213 366 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 INHBEP58166 350 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 ACTR3P61158 418 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 HTRA3P83110 453 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 MPP3Q13368 585 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 NOL9Q5SY16 702 aaKnown RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 TTC9BQ8N6N2 239 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 KBTBD7Q8WVZ9 684 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 TRIM8Q9BZR9 551 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 PNPLA8Q9NP80 782 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 CRTAC1Q9NQ79 661 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 ANLNQ9NQW6 1124 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 SSC5DA1L4H1 1573 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 MAGEC1O60732 1142 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 LYNP07948 512 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 PRAMEP78395 509 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 TSPY1Q01534 308 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 WASHC5Q12768 1159 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 PRPSAP1Q14558 356 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 ZNF792Q3KQV3 632 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 KYAT3Q6YP21 454 aaKnown RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 C16orf59Q7L2K0 433 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 PCDH20Q8N6Y1 951 aaKnown RBP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 NPWQ8N729 165 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 QKIQ96PU8 341 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A2-204ENST00000409416 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 SP110Q9HB58 689 aa13.61□□□□□ -0.23
COL6A2-204ENST00000409416 RRN3P2A6NIE6 340 aa13.6□□□□□ -0.23
COL6A2-204ENST00000409416 GCATO75600 419 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms