RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 PLK1P53350 603 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 ENPEPQ07075 957 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 CUL4AQ13619 759 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SPIDRQ14159 915 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 NR0B2Q15466 257 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 TBR1Q16650 682 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SEL1L3Q68CR1 1132 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 CXorf57Q6NSI4 855 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 KYAT3Q6YP21 454 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 C14orf80Q86SX3 495 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 PARGQ86W56 976 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 BMFQ96LC9 184 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 PCDHGA4Q9Y5G9 962 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 POM121BA6NF01 834 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 BNIP3LO60238 219 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 ZNF18P17022 549 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 INHBCP55103 352 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 DLG2Q15700 870 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 B3GNT8Q7Z7M8 397 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC35F3Q8IY50 421 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 OR52K2Q8NGK3 314 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 WDR48Q8TAF3 677 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 FAM174AQ8TBP5 190 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 ALG14Q96F25 216 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 BOCQ9BWV1 1114 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC25A18Q9H1K4 315 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 EPN3Q9H201 632 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 SYNDIG1Q9H7V2 258 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
CHRNA1-203ENST00000409219 TCAF2A6NFQ2 919 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 RNF103O00237 685 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 NTN3O00634 580 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 TPP1O14773 563 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 LIPCP11150 499 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 WT1P19544 449 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 GTF2H1P32780 548 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 UGT1A5P35504 534 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 FGL2Q14314 439 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 CLCA4Q14CN2 919 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 NFIL3Q16649 462 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 VASH2Q86V25 355 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 JAMLQ86YT9 394 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 LMX1AQ8TE12 382 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 IL12RB2Q99665 862 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 SPTBN1Q01082 2364 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 TEP1Q99973 2627 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-203ENST00000409219 F5H5T6 163 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 RAD51BO15315 384 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 PCDH8O95206 1070 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 APOEP02649 317 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 VDRP11473 427 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 HGFP14210 728 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 JUNDP17535 347 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 CYP4F2P78329 520 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 CUL2Q13617 745 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 UBR7Q8N806 425 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 NAT6Q93015 286 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 MIS12Q9H081 205 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 EPB41L5Q9HCM4 733 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 HS3ST3A1Q9Y663 406 aa13.17□□□□□ -0.3
CHRNA1-203ENST00000409219 SPINT1O43278 529 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 YEATS4O95619 227 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SRCP12931 536 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 NUCB2P80303 420 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 FOXK1P85037 733 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms