RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 EIF3CQ99613 913 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 OMDQ99983 421 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 CTTNBP2NLQ9P2B4 639 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 PILRBQ9UKJ0 227 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 HPCAL4Q9UM19 191 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 FARP1Q9Y4F1 1045 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 ATXN2Q99700 1313 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 CFAP54Q96N23 3096 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 MYO1FO00160 1098 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 EEF2KO00418 725 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 KHNYNO15037 678 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 FGF10O15520 208 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 DAPK3O43293 454 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 H2AFZP0C0S5 128 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 H2AFVQ71UI9 128 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 ZNF354CQ86Y25 554 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 PSTKQ8IV42 348 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 CCDC114Q96M63 670 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 KCTD15Q96SI1 283 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 PACSIN1Q9BY11 444 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 SGK2Q9HBY8 427 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 CEP250Q9BV73 2442 aa18.33■□□□□ 0.53
PDLIM2-206ENST00000409141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 A0A1W2PP55 124 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 METTL12A8MUP2 240 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 MEI4A8MW99 385 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 WASH4PA8MWX3 477 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 PATE3B3GLJ2 98 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 MCF2LO15068 1137 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 GDF9O60383 454 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 RNASEH2AO75792 299 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 C5AR1P21730 350 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 ARF5P84085 180 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 RSPO4Q2I0M5 234 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 PPP6R3Q5H9R7 873 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 FAM46CQ5VWP2 391 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 CYP4V2Q6ZWL3 525 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 HDDC3Q8N4P3 179 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 ZNF564Q8TBZ8 553 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 MRFAP1L1Q96HT8 127 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 ZWILCHQ9H900 591 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 DONSONQ9NYP3 566 aa18.33■□□□□ 0.52
PDLIM2-206ENST00000409141 ALOX15BO15296 676 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 KDELR3O43731 214 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 SEMA4FO95754 770 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 TCF4P15884 667 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 MAOBP27338 520 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 IL1R2P27930 398 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 HOXD12P35452 270 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 RECQLP46063 649 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 ID4P47928 161 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 SERPINH1P50454 418 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 DNA2P51530 1060 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 YBEYP58557 167 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 TRIM61Q5EBN2 209 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 KCNT1Q5JUK3 1230 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 C22orf39Q6P5X5 142 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 UMODL1-AS1Q8N2C9 162 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 NIPA2Q8N8Q9 360 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 TC2NQ8N9U0 490 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 OR2A12Q8NGT7 310 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 CEP76Q8TAP6 659 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 PCED1AQ9H1Q7 454 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 C6orf106Q9H6K1 298 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 NOL6Q9H6R4 1146 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 UVRAGQ9P2Y5 699 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 SERGEFQ9UGK8 458 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 PPM1HQ9ULR3 514 aa18.32■□□□□ 0.52
PDLIM2-206ENST00000409141 NUP205Q92621 2012 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 CXorf51AA0A1B0GTR3 108 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RASA4BC9J798 803 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RASA4O43374 803 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 TMEM253P0C7T8 217 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 GOT1P17174 413 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 SDHBP21912 280 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 SSR1P43307 286 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 GEMIN4P57678 1058 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 IRX4P78413 519 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 DUOXA1Q1HG43 343 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 PEAR1Q5VY43 1037 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RFX8Q6ZV50 586 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RABEPKQ7Z6M1 372 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 AADATQ8N5Z0 425 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 PIP4K2CQ8TBX8 421 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 HSPH1Q92598 858 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RMDN1Q96DB5 314 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 NUSAP1Q9BXS6 441 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 CEP44Q9C0F1 390 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 RXFP3Q9NSD7 469 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 CDV3Q9UKY7 258 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 SARDHQ9UL12 918 aa18.31■□□□□ 0.52
PDLIM2-206ENST00000409141 FZD4Q9ULV1 537 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms