RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 NSL1Q96IY1 281 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 EFCAB1Q9HAE3 211 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 HIST1H2ABP04908 130 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 PYGMP11217 842 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 IFNGR2P38484 337 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 MMRN1Q13201 1228 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 HIST3H2AQ7L7L0 130 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CTU1Q7Z7A3 348 aaKnown RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 ARID3BQ8IVW6 561 aaPredicted RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 SH2D3CQ8N5H7 860 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 HIST1H2ACQ93077 130 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 MYOCQ99972 504 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 B2RBV5 119 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 XPO1O14980 1071 aaKnown RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 VAPBO95292 243 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ELP6Q0PNE2 266 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 DUSP4Q13115 394 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 C9orf57Q5W0N0 161 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 TRAF7Q6Q0C0 670 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CHST9Q7L1S5 443 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ITGAXP20702 1163 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 BRCC3P46736 316 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 SNX30Q5VWJ9 437 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 RINLQ6ZS11 566 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 FAM35AQ86V20 835 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ACTRT1Q8TDG2 376 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 MRPL42Q9Y6G3 142 aaKnown RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 SYN3O14994 580 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CCL5P13501 91 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ABL2P42684 1182 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CCZ1BP86790 482 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CCZ1P86791 482 aaPredicted RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 CEP78Q5JTW2 689 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 PAGE2Q7Z2X7 111 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 TNS4Q8IZW8 715 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 C12orf50Q8NA57 414 aaPredicted RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 PACSIN1Q9BY11 444 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 SLC24A2Q9UI40 661 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 ERVW-1Q9UQF0 538 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 CAB39Q9Y376 341 aaPredicted RBP16.72■□□□□ 0.27
CBX6-202ENST00000407418 PCDHA2Q9Y5H9 948 aa16.72■□□□□ 0.27
CBX6-202ENST00000407418 PTPRJQ12913 1337 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 TTPAP49638 278 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 MTMR14Q8NCE2 650 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 FLCNQ8NFG4 579 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 OR2W6PQ8NHA6 318 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DEPDC7Q96QD5 511 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 RNPEPQ9H4A4 650 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 ARIH1Q9Y4X5 557 aaPredicted RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 A0A1B0GW55 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L2P0CJ85 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L3P0CJ86 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L4P0CJ87 422 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L5P0CJ88 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L6P0CJ89 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4L7P0CJ90 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 SERPINB3P29508 390 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 PSMD7P51665 324 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 GRIK5Q16478 980 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 PCID2Q5JVF3 399 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 KCNT2Q6UVM3 1135 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 RASAL3Q86YV0 1011 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 EFCAB3Q8N7B9 438 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUX4Q9UBX2 424 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 ZNF536O15090 1300 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 FSTL1Q12841 308 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 SYT12Q8IV01 421 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 HDDC3Q8N4P3 179 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 CNPPD1Q9BV87 410 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 KCNF1Q9H3M0 494 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 AGO1Q9UL18 857 aaKnown RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 SLIT3O75094 1523 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 C1orf232A0A0U1RR37 186 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 TBL3Q12788 808 aaKnown RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 TMEM132CQ8N3T6 1108 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 KCTD14Q9BQ13 255 aaPredicted RBP16.71■□□□□ 0.27
CBX6-202ENST00000407418 DUSP16Q9BY84 665 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 NR2E1Q9Y466 385 aa16.71■□□□□ 0.27
CBX6-202ENST00000407418 TFE3P19532 575 aaPredicted RBP16.71■□□□□ 0.26
CBX6-202ENST00000407418 LSP1P33241 339 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 RTP1P59025 263 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 BRMS1LQ5PSV4 323 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 PIGZQ86VD9 579 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 GALNT4Q8N4A0 578 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 KLHL23Q8NBE8 558 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.26
CBX6-202ENST00000407418 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 SNX6Q9UNH7 406 aa16.71■□□□□ 0.26
CBX6-202ENST00000407418 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.7■□□□□ 0.26
CBX6-202ENST00000407418 RALGDSQ12967 914 aa16.7■□□□□ 0.26
CBX6-202ENST00000407418 BIKQ13323 160 aa16.7■□□□□ 0.26
CBX6-202ENST00000407418 CRHR2Q13324 411 aa16.7■□□□□ 0.26
CBX6-202ENST00000407418 FBXL16Q8N461 479 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms