RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SLC18A3Q16572 532 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 AP5B1Q2VPB7 878 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 LSM12Q3MHD2 195 aaKnown RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPATS1Q496A3 300 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 SH2D4BQ5SQS7 431 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 C10orf76Q5T2E6 689 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CYP20A1Q6UW02 462 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMCO3Q6UWJ1 677 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 Q6YL49 198 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 GALNT5Q7Z7M9 940 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 ULK2Q8IYT8 1036 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CPXM2Q8N436 756 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 FAM47BQ8NA70 645 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 SCFD2Q8WU76 684 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 HSPH1Q92598 858 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CELF1Q92879 486 aaKnown RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF503Q96F45 646 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 FEM1CQ96JP0 617 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 PDLIM2Q96JY6 352 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 BBC3Q96PG8 261 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 IFT27Q9BW83 186 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 USP44Q9H0E7 712 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 TTYH1Q9H313 450 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 SEPT11Q9NVA2 429 aaKnown RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZDHHC7Q9NXF8 308 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 ARL15Q9NXU5 204 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 TNFSF13BQ9Y275 285 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 KCNE2Q9Y6J6 123 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 PIAS3Q9Y6X2 628 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 PCF11O94913 1555 aaKnown RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 MTUS2Q5JR59 1369 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 OR6C68A6NDL8 312 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CEP104O60308 925 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 PLOD3O60568 738 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 RNF8O76064 485 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 JTBO76095 146 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 MLYCDO95822 493 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CHRM5P08912 532 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 RFPL3SP0C7P2 107 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 IRF1P10914 325 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF8P17098 575 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 FMO4P31512 558 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CPOXP36551 454 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 MPLP40238 635 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 PRAMEP78395 509 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 MC1RQ01726 317 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 POU5F1Q01860 360 aaKnown RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CREB5Q02930 508 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 GSTA3Q16772 222 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CERKLQ49MI3 558 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CDC73Q6P1J9 531 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 NCEH1Q6PIU2 408 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC30A9Q6PML9 568 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 DHRS13Q6UX07 377 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 RANBP10Q6VN20 620 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 IKBIPQ70UQ0 350 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 ENOSF1Q7L5Y1 443 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 NEK8Q86SG6 692 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 TADA2BQ86TJ2 420 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 TMTC2Q8N394 836 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 TTC39CQ8N584 583 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 LSMEM1Q8N8F7 131 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 DNAAF1Q8NEP3 725 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 OR52N4Q8NGI2 321 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 KCNG4Q8TDN1 519 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 C2CD4CQ8TF44 421 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 KAT2BQ92831 832 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAM120BQ96EK7 910 aaKnown RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 P2RY11Q96G91 374 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CCDC34Q96HJ3 373 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 TEFMQ96QE5 360 aaKnown RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 FRG2BQ96QU4 278 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 CLSTN3Q9BQT9 956 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 ANKEF1Q9NU02 776 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 TMEM248Q9NWD8 314 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 PEMTQ9UBM1 199 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 UPB1Q9UBR1 384 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF70Q9UC06 446 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 ST3GAL5Q9UNP4 418 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC8A2Q9UPR5 921 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 SNX8Q9Y5X2 465 aa5.08□□□□□ -1.6
HMGB3P18-201ENST00000406327 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ARHGAP10A1A4S6 786 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 PTGES3LE9PB15 166 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 POC1B-GALNT4F8VUJ3 575 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 VILLO15195 856 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 BCAT2O15382 392 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 AHCYL1O43865 530 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 POU1F1P28069 291 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 TYK2P29597 1187 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 KRT20P35900 424 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 PPARGP37231 505 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 GABRB2P47870 512 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 YWHAZP63104 245 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 OLR1P78380 273 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 EFEMP1Q12805 493 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 EPS8Q12929 822 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms