RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 HSPA4LO95757 839 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 DARSP14868 501 aaKnown RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 PTPN1P18031 435 aaKnown RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 ERCC2P18074 760 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 EMP3P54852 163 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 PKDCCQ504Y2 493 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 FAM72AQ5TYM5 149 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 PDPK2PQ6A1A2 396 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 FAM72DQ6L9T8 149 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 FAM72BQ86X60 149 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 AGAP2Q99490 1192 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 CCT7Q99832 543 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 FIS1Q9Y3D6 152 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 RRN3P2A6NIE6 340 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 JCHAINP01591 159 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 SERPINA6P08185 405 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 CRHR1P34998 444 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 GARSP41250 739 aaKnown RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 HNRNPDQ14103 355 aaKnown RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 SLC25A52Q3SY17 297 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 SV2CQ496J9 727 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 NXNQ6DKJ4 435 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 SH2D5Q6ZV89 423 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 ZNF354CQ86Y25 554 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 LPPQ93052 612 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 MAML3Q96JK9 1138 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 SENP6Q9GZR1 1112 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 GPAMQ9HCL2 828 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 C20orf96Q9NUD7 363 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 PIGVQ9NUD9 493 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 TMEM216Q9P0N5 145 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 CASTOR2A6NHX0 329 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 FAM159BA6NKW6 160 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 AVPR1AP37288 418 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 CERCAMQ5T4B2 595 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 MAMDC4Q6UXC1 1216 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 GIPC3Q8TF64 312 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 MFSD3Q96ES6 412 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 TBC1D30Q9Y2I9 924 aa15.3■□□□□ 0.04
ATG4B-206ENST00000405546 RBMX2Q9Y388 322 aaKnown RBP15.3■□□□□ 0.04
ATG4B-206ENST00000405546 H3BNX3 289 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 DFFAO00273 331 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 ADCY6O43306 1168 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 ALDOAP04075 364 aaKnown RBP15.29■□□□□ 0.04
ATG4B-206ENST00000405546 ATP1A4Q13733 1029 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 LPIN1Q14693 890 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 PQLC1Q8N2U9 271 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 PIWIL2Q8TC59 973 aaKnown RBP15.29■□□□□ 0.04
ATG4B-206ENST00000405546 CDRT15Q96T59 188 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 PNPLA8Q9NP80 782 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 NUDT5Q9UKK9 219 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 SLC39A10Q9ULF5 831 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
ATG4B-206ENST00000405546 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 YJEFN3A6XGL0 299 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 NRP1O14786 923 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 RALBP11234 206 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 NPR3P17342 541 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 TPSB2P20231 275 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 SNX17Q15036 470 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 TPSAB1Q15661 275 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 HSFY1Q96LI6 401 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 GAD1Q99259 594 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 WDR55Q9H6Y2 383 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-206ENST00000405546 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 IPPQ9Y573 584 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 CROCCQ5TZA2 2017 aa15.29■□□□□ 0.04
ATG4B-206ENST00000405546 STRNO43815 780 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 CCDC166P0CW27 439 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 XRCC1P18887 633 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-206ENST00000405546 RXRGP48443 463 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 SEMA5AQ13591 1074 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 C4orf22Q6V702 233 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 UTS2BQ765I0 119 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 PDZD4Q76G19 769 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-206ENST00000405546 LPCAT2Q7L5N7 544 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 MAVSQ7Z434 540 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-206ENST00000405546 SNX31Q8N9S9 440 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 TSNARE1Q96NA8 513 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 ADAMTS10Q9H324 1103 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 INIPQ9NRY2 104 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 IARS2Q9NSE4 1012 aaKnown RBP15.28■□□□□ 0.04
ATG4B-206ENST00000405546 GLRA3O75311 464 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 COL6A2P12110 1019 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 NOS2P35228 1153 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 SOX11P35716 441 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 CCR10P46092 362 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 GRM2Q14416 872 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 MFSD10Q14728 455 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 TEX44Q53QW1 395 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 ARHGAP17Q68EM7 881 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 DCLK2Q8N568 766 aa15.28■□□□□ 0.04
ATG4B-206ENST00000405546 ARRDC4Q8NCT1 418 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms