RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SMIM18P0DKX4 95 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 PIK3R1P27986 724 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 HK2P52789 917 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 PAFAH1B3Q15102 231 aaKnown RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 STON2Q8WXE9 905 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 ZNF669Q96BR6 464 aaPredicted RBP20.19■□□□□ 0.82
CCDC47-202ENST00000403162 HSFY1Q96LI6 401 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 MID2Q9UJV3 735 aa20.19■□□□□ 0.82
CCDC47-202ENST00000403162 A0A1B0GVG6 124 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 RGSL1A5PLK6 1076 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 CAPN8A6NHC0 703 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
CCDC47-202ENST00000403162 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
CCDC47-202ENST00000403162 LAMB3Q13751 1172 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 TLR1Q15399 786 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 SATL1Q86VE3 508 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 CCNYQ8ND76 341 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 OR52K1Q8NGK4 314 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 GCNAQ96QF7 691 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ILKAPQ9H0C8 392 aaPredicted RBP20.18■□□□□ 0.82
CCDC47-202ENST00000403162 Q9H521 79 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ZCWPW2A0A1B0GU75 182 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 PDLIM1O00151 329 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 MATN2O00339 956 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ATP9BO43861 1147 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ADORA2BP29275 332 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 SULT1E1P49888 294 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 NUDT2P50583 147 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ZFP1Q6P2D0 407 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 CRYBG2Q8N1P7 616 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 KYQ8NBH2 561 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 URGCPQ8TCY9 931 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 NLRP7Q8WX94 980 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 ZMAT2Q96NC0 199 aaKnown RBP20.18■□□□□ 0.82
CCDC47-202ENST00000403162 GATA5Q9BWX5 397 aaPredicted RBP20.18■□□□□ 0.82
CCDC47-202ENST00000403162 NMRAL1Q9HBL8 299 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 OXSMQ9NWU1 459 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 RAB26Q9ULW5 256 aa20.18■□□□□ 0.82
CCDC47-202ENST00000403162 MBLAC1A4D2B0 266 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 AP2A1O95782 977 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ETS2P15036 469 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ACLYP53396 1101 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 CSE1LP55060 971 aaKnown RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 IRF9Q00978 393 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ZBTB6Q15916 424 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ARHGAP22Q7Z5H3 698 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 SETD3Q86TU7 594 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 SPATA24Q86W54 205 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 CATSPER1Q8NEC5 780 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 RP9Q8TA86 221 aaKnown RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ATXN7L3BQ96GX2 97 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 CXCL16Q9H2A7 254 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 VANGL2Q9ULK5 521 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 RAP2CQ9Y3L5 183 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 TREHO43280 583 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 TIMM44O43615 452 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 DNAJA2O60884 412 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 C2P06681 752 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 APOA4P06727 396 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 CYP2C9P11712 490 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 SERPINB5P36952 375 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 ADAM17P78536 824 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 DPYSQ14117 519 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 RARS2Q5T160 578 aaKnown RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 OTUD1Q5VV17 481 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 PID1Q7Z2X4 250 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 SNX32Q86XE0 403 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 DSELQ8IZU8 1212 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 DEFB106AQ8N104 65 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 CPSF7Q8N684 471 aaKnown RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 NETO2Q8NC67 525 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 RDH11Q8TC12 318 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 SNX27Q96L92 541 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 PRICKLE1Q96MT3 831 aaPredicted RBP20.17■□□□□ 0.82
CCDC47-202ENST00000403162 AGAP2Q99490 1192 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 EPAS1Q99814 870 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 MCMBPQ9BTE3 642 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 BFARQ9NZS9 450 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 BCAP29Q9UHQ4 241 aa20.17■□□□□ 0.82
CCDC47-202ENST00000403162 AIM2O14862 343 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 HDAC3O15379 428 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 HCRTO43612 131 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 DAB1O75553 588 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 CAPN15O75808 1086 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 CCL5P13501 91 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 ADSLP30566 484 aaPredicted RBP20.16■□□□□ 0.82
CCDC47-202ENST00000403162 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 ZNF423Q2M1K9 1284 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 PIGGQ5H8A4 983 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 BNC2Q6ZN30 1099 aaPredicted RBP20.16■□□□□ 0.82
CCDC47-202ENST00000403162 BNIPLQ7Z465 357 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 ARRDC4Q8NCT1 418 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 BEST2Q8NFU1 509 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 DGCR14Q96DF8 476 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms