RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ALFQ53S48 1182 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 GCNT7Q6ZNI0 430 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 SPACA3Q8IXA5 215 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 OR13H1Q8NG92 308 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 OR4C6Q8NH72 309 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 NAF1Q96HR8 494 aaKnown RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 CRACR2AQ9BSW2 395 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 CALN1Q9BXU9 219 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 AJAP1Q9UKB5 411 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 ZFR2Q9UPR6 939 aaKnown RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 BSNQ9UPA5 3926 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 LRP4O75096 1905 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 FAM170AA1A519 330 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 TK2O00142 265 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 KPNA3O00505 521 aaPredicted RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SMAD6O43541 496 aaKnown RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 HSF2BPO75031 334 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 PAGE1O75459 146 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ADCY5O95622 1261 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ERBB2P04626 1255 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SLC2A3P11169 496 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 TFE3P19532 575 aaPredicted RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SLC9A1P19634 815 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 RRM1P23921 792 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ACTN2P35609 894 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 NUDT1P36639 197 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 USP8P40818 1118 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 OXCT1P55809 520 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 MARSP56192 900 aaKnown RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 MORC3Q14149 939 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF542PQ5EBM4 170 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SEL1L3Q68CR1 1132 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 OR6B2Q6IFH4 312 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 OLFML1Q6UWY5 402 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 LINGO4Q6UY18 593 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 GPR155Q7Z3F1 870 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF843Q8N446 348 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 CHST14Q8NCH0 376 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 C1orf131Q8NDD1 294 aaKnown RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 OR2A12Q8NGT7 310 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
LINC00544-201ENST00000400540 SIK2Q9H0K1 926 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 VPS51Q9UID3 782 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
LINC00544-201ENST00000400540 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 BOD1L1Q8NFC6 3051 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 RP1P56715 2156 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 BICDL2A1A5D9 508 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 M0QYT0 321 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 CLDN11O75508 207 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 DAB1O75553 588 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 PIAS2O75928 621 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 NEBLO76041 1014 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 MPOP05164 745 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 RHOCP08134 193 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 GLI1P08151 1106 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 PLA2G2AP14555 144 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 HNRNPA2B1P22626 353 aaKnown RBP12.21□□□□□ -0.45
LINC00544-201ENST00000400540 CHRNA3P32297 505 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 PPP1R2P41236 205 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 C5orf22Q49AR2 442 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 PTPN20Q4JDL3 420 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 HORMAD1Q86X24 394 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF683Q8IZ20 524 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 GRIN3AQ8TCU5 1115 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 APOLD1Q96LR9 279 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 LGMNQ99538 433 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 PLCB1Q9NQ66 1216 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 ASNSD1Q9NWL6 643 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
LINC00544-201ENST00000400540 U3KQA8 63 aa12.21□□□□□ -0.45
LINC00544-201ENST00000400540 A0A0D9SEW6 157 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 OPA1O60313 960 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 ENDOD1O94919 500 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 GNA14O95837 355 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 PNMA6AP0CW24 399 aaPredicted RBP12.2□□□□□ -0.46
LINC00544-201ENST00000400540 CKMT1AP12532 417 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 CDH4P55283 916 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 GABREP78334 506 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 E2F1Q01094 437 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 PAK1Q13153 545 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms