RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 CCDC114Q96M63 670 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 SCLT1Q96NL6 688 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 TUBGCP5Q96RT8 1024 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 PRMT1Q99873 361 aaKnown RBP7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 HEMGNQ9BXL5 484 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 MRPL47Q9HD33 250 aaKnown RBP7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 SCINQ9Y6U3 715 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 OTOFQ9HC10 1997 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZSWIM8A7E2V4 1837 aa7.05□□□□□ -1.28
CSNK2A1-204ENST00000400227 TMEM191CA6NGB0 347 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 VGLL3A8MV65 326 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 H0YHG0 523 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 NEMP1O14524 444 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 THAP12O43422 761 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 LIASO43766 372 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FAM189A1O60320 539 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ASS1P00966 412 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 GSTA1P08263 222 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ABHD2P08910 425 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 TMEM191BP0C7N4 346 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CETPP11597 493 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CD58P19256 250 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 MMP8P22894 467 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ATP5DP30049 168 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 PTPN7P35236 360 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 AP3M2P53677 418 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CNTN2Q02246 1040 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 XRCC4Q13426 336 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 EIF4HQ15056 248 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 STXBP2Q15833 593 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 KYNUQ16719 465 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZFYVE27Q5T4F4 411 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 LRRC38Q5VT99 294 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 IZUMO3Q5VZ72 239 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 HIBCHQ6NVY1 386 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DRICH1Q6PGQ1 229 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 OTOP2Q7RTS6 562 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 KBTBD2Q8IY47 623 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 RCOR2Q8IZ40 523 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZCCHC9Q8N567 271 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 C7orf31Q8N865 590 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CHST13Q8NET6 341 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DNERQ8NFT8 737 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CKAP2Q8WWK9 683 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZNF606Q8WXB4 792 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ARHGEF2Q92974 986 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 C20orf173Q96LM9 149 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 SLITRK1Q96PX8 696 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 SPC25Q9HBM1 224 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 KLC4Q9NSK0 619 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 PARVAQ9NVD7 372 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DNAJC17Q9NVM6 304 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 HOXC10Q9NYD6 342 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 EURLQ9NYK6 297 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CTNNAL1Q9UBT7 734 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FBXO40Q9UH90 709 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 IP6K2Q9UHH9 426 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FZD1Q9UP38 647 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 AFG3L2Q9Y4W6 797 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 EVPLQ92817 2033 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DICER1Q9UPY3 1922 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 A0A0G2JNJ9 132 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 TMEM120BA0PK00 339 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FOXO6A8MYZ6 492 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FZD9O00144 591 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DNALI1O14645 258 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 SNX3O60493 162 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 DNAJC6O75061 913 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 LSM8O95777 96 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CALB1P05937 261 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 VIMP08670 466 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 TCF4P15884 667 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 UBA1P22314 1058 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 EDNRBP24530 442 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CDH5P33151 784 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CNR2P34972 360 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 IFNAR2P48551 515 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 VPS41P49754 854 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ALDH5A1P51649 535 aaPredicted RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 RPL7AP62424 266 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 OGDHQ02218 1023 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 MCL1Q07820 350 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 STAT4Q14765 748 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 MYBPC3Q14896 1274 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 PRAMEF9Q5VWM5 478 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 MFSD7Q6UXD7 560 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 PRUNE1Q86TP1 453 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 APOBEC3FQ8IUX4 373 aaKnown RBP7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 WDR49Q8IV35 697 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CCDC50Q8IVM0 306 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 FUKQ8N0W3 1084 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 CCDC89Q8N998 374 aa7.04□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZNF610Q8N9Z0 462 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms