RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 TMOD1P28289 359 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PSMC2P35998 433 aaKnown RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ETV3P41162 512 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 MTHFRP42898 656 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SOX8P57073 446 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SESN2P58004 480 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 C21orf58P58505 322 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 HTD2P86397 168 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CDC42EP1Q00587 391 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ZBTB16Q05516 673 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 FPGSQ05932 587 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CAMK2DQ13557 499 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ACAP1Q15027 740 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PTGISQ16647 500 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ALG11Q2TAA5 492 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 BTBD16Q32M84 506 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LRIT3Q3SXY7 679 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 MPP7Q5T2T1 576 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PRAMEF9Q5VWM5 478 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 KRT40Q6A162 431 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ADALQ6DHV7 355 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 KIAA1841Q6NSI8 718 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 KIAA0408Q6ZU52 694 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PLEKHM3Q6ZWE6 761 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LRRC8DQ7L1W4 858 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LPCAT2Q7L5N7 544 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SYT13Q7L8C5 426 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SERINC5Q86VE9 423 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LINC00346Q8IVM7 164 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CCDC83Q8IWF9 413 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ULK2Q8IYT8 1036 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TDHQ8IZJ6 230 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TMEM199Q8N511 208 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 AOPEPQ8N6M6 819 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 FBXO18Q8NFZ0 1043 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CEP76Q8TAP6 659 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CAGE1Q8TC20 777 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 BADQ92934 168 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PERPQ96FX8 193 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 GSDMAQ96QA5 445 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 LBHD1Q9BQE6 289 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ZNF577Q9BSK1 485 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CRACR2AQ9BSW2 395 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 FUZQ9BT04 418 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 C1orf43Q9BWL3 253 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PCDHAC1Q9H158 963 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 FOXP1Q9H334 677 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TP63Q9H3D4 680 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 HIPK3Q9H422 1215 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SMARCAD1Q9H4L7 1026 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SSU72Q9NP77 194 aaKnown RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 KCNMB3Q9NPA1 279 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 NRIP3Q9NQ35 241 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ERAP1Q9NZ08 941 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 PLA2G3Q9NZ20 509 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 MRPL15Q9P015 296 aaKnown RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 ACTR3BQ9P1U1 418 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 HDAC6Q9UBN7 1215 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CPSF3Q9UKF6 684 aaKnown RBP5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 DSEQ9UL01 958 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 USP18Q9UMW8 372 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 AP4E1Q9UPM8 1137 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 EXOC7Q9UPT5 735 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 TCHHQ07283 1943 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 CHD7Q9P2D1 2997 aa5.58□□□□□ -1.52
HMGB3P7-201ENST00000400214 SHISA3A0PJX4 238 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 C17orf102A2RUQ5 167 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 C7orf72A4D263 438 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 NPIPB15A6NHN6 443 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM90A27PA6NNH2 459 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 BTBD18B2RXH4 712 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 TMEM233B4DJY2 109 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 H7BY64 318 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 PYCARD-AS1I3L0S3 204 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 AP3B1O00203 1094 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 CASQ2O14958 399 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 TP73O15350 636 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 TGFB1I1O43294 461 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 BUB1BO60566 1050 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 ADAM11O75078 769 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 TDP2O95551 362 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 C4BPAP04003 597 aaKnown RBP5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 SMIM10L2AP0DMW4 78 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 SMIM10L2BP0DMW5 78 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 TNNT1P13805 278 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 VAV1P15498 845 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 CSF2RAP15509 400 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 FGFR3P22607 806 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 FPR2P25090 351 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 NFKBIAP25963 317 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 U2AF2P26368 475 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 SFNP31947 248 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 CYP2C18P33260 490 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 RFC2P35250 354 aa5.57□□□□□ -1.52
HMGB3P7-201ENST00000400214 MXI1P50539 228 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms