RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 AP3D1O14617 1153 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
VAPA-202ENST00000400000 MAPKAPK2P49137 400 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 HK2P52789 917 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 GPC2Q8N158 579 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TRPM4Q8TD43 1214 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 PMEPA1Q969W9 287 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ASAH2Q9NR71 780 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TAS2R14Q9NYV8 317 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ERAL1O75616 437 aaKnown RBP13.95□□□□□ -0.18
VAPA-202ENST00000400000 FSTL1Q12841 308 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 FAM45BPQ6NSW5 357 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TAF2Q6P1X5 1199 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 C4orf19Q8IY42 314 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 GMCL1P1Q8NEA9 526 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 COQ7Q99807 217 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
VAPA-202ENST00000400000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 MYL12BO14950 172 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 MYL12AP19105 171 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 IQCF2Q8IXL9 164 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 NEK7Q8TDX7 302 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SELENOMQ8WWX9 145 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 PRRG4Q9BZD6 226 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 NOL6Q9H6R4 1146 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 ZW10O43264 779 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 ALAS2P22557 587 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SCRN3Q0VDG4 424 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 OR56A4Q8NGH8 313 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 CROTQ9UKG9 612 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 KIAA1257Q9ULG3 409 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 ABHD14A-ACY1A0A1B0GW23 586 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 GTPBP1O00178 669 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 DMPKQ09013 629 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 PYDC1Q8WXC3 89 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 ZNF304Q9HCX3 659 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 CD84Q9UIB8 345 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 IQCF5A8MTL0 148 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 KPNA6O60684 536 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 FAM151BQ6UXP7 276 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 AHI1Q8N157 1196 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 HDAC7Q8WUI4 952 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 CDK5RAP1Q96SZ6 601 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TRIT1Q9H3H1 467 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 RPRD1BQ9NQG5 326 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 RBM7Q9Y580 266 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TRPM1Q7Z4N2 1603 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 TEX28O15482 410 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 CBX6O95503 412 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 IDH2P48735 452 aaKnown RBP13.94□□□□□ -0.18
VAPA-202ENST00000400000 RARRES1P49788 294 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 KLHL12Q53G59 568 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 DHFR2Q86XF0 187 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 DNAJB14Q8TBM8 379 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 PWWP2AQ96N64 755 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SNX6Q9UNH7 406 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 SESN1Q9Y6P5 492 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 MED14O60244 1454 aa13.94□□□□□ -0.18
VAPA-202ENST00000400000 PECAM1P16284 738 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 FASP25445 335 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 S100A3P33764 101 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ACAP1Q15027 740 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ATP13A4Q4VNC1 1196 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 GCNT7Q6ZNI0 430 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ANKS1BQ7Z6G8 1248 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 FAM45AQ8TCE6 357 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RUBCNQ92622 972 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 NFASCO94856 1347 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.182e-10■■■□□ 15.3
VAPA-202ENST00000400000 EPN2O95208 641 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PGAM1P18669 254 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RPA3P35244 121 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms