RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 RIPOR1Q6ZS17 1223 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZNF621Q6ZSS3 439 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 USP50Q70EL3 339 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 NAT16Q8N8M0 369 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PRELID2Q8N945 189 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 KYQ8NBH2 561 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 EMID1Q96A84 441 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 SRPK1Q96SB4 655 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 PRPF18Q99633 342 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 TBCDQ9BTW9 1192 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NFKBIZQ9BYH8 718 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZFP14Q9HCL3 533 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BPIFA1Q9NP55 256 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 EXOSC4Q9NPD3 245 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 AVENQ9NQS1 362 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 ACSS2Q9NR19 701 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ABCC13Q9NSE7 274 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 DDX28Q9NUL7 540 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 COL20A1Q9P218 1284 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PCDHA11Q9Y5I1 949 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ATP6AP2A0A1C7CYW4 349 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MOXD2PA6NHM9 499 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FOXO6A8MYZ6 492 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ATP6AP2O75787 350 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 IMPDH2P12268 514 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CRABP2P29373 138 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TM4SF1P30408 202 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CHKAP35790 457 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CCL23P55773 120 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MRPS22P82650 360 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 USP4Q13107 963 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CTBP1Q13363 440 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NBPF20Q3BBV1 942 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ERAP2Q6P179 960 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZBTB49Q6ZSB9 765 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 RD3Q7Z3Z2 195 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CCNJLQ8IV13 435 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FBXO39Q8N4B4 442 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PPTC7Q8NI37 304 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 GRIN3AQ8TCU5 1115 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 HELQQ8TDG4 1101 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 LGMNQ99538 433 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MYLK2Q9H1R3 596 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CACNG4Q9UBN1 327 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 VAV3Q9UKW4 847 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PARP14Q460N5 1801 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 RAD51BO15315 384 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 LIASO43766 372 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 RNASEH1O60930 286 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 FAM155BO75949 473 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 WDR47O94967 919 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 SPATA31D3P0C874 917 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 MYBL2P10244 700 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 ATP4AP20648 1035 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 GRK2P25098 689 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 SERPINH1P50454 418 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 KPNA1P52294 538 aaPredicted RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 RHOAP61586 193 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 MRPS35P82673 323 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 CDK16Q00536 496 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CDH17Q12864 832 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 UBAP2LQ14157 1087 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 CRYMQ14894 314 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 HIST2H2ACQ16777 129 aaPredicted RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 DDR2Q16832 855 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 RAP1GAP2Q684P5 730 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 HIST2H2AA3Q6FI13 130 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 KYAT3Q6YP21 454 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 SPATA31D4Q6ZUB0 917 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 SLC51AQ86UW1 340 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 ITIH5Q86UX2 942 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 NT5DC4Q86YG4 428 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 TRAPPC5Q8IUR0 188 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 RSPH1Q8WYR4 309 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 GLMNQ92990 594 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 PHF21AQ96BD5 680 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CERS2Q96G23 380 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 RNF157Q96PX1 679 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CPXM1Q96SM3 734 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 TBCBQ99426 244 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 TBL1YQ9BQ87 522 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 MRPL45Q9BRJ2 306 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 BTBD10Q9BSF8 475 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 TMEM245Q9H330 911 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 MPP6Q9NZW5 540 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 BTBD7Q9P203 1132 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 SALL4Q9UJQ4 1053 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 DNMT3LQ9UJW3 386 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 MKI67P46013 3256 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 CHADO15335 359 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 ERBB2P04626 1255 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CD52P31358 61 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 GRK3P35626 688 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CCT8P50990 548 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 ZNF143P52747 638 aaPredicted RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 CAPSQ13938 189 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 TRMT5Q32P41 509 aaKnown RBP3.3□□□□□ -1.88
KNL1-202ENST00000399668 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
KNL1-202ENST00000399668 CNSTQ6PJW8 725 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms