RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZCCHC7Q8N3Z6 543 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 HELQQ8TDG4 1101 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FAIM2Q9BWQ8 316 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SPAG4Q9NPE6 437 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 IL17RBQ9NRM6 502 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CLN6Q9NWW5 311 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 INVSQ9Y283 1065 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 NCKAP1Q9Y2A7 1128 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 COMMD3-BMI1R4GMX3 469 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 GAKO14976 1311 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 GYS1P13807 737 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 MIPP30301 263 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PPATQ06203 517 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TRIM25Q14258 630 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PDK4Q16654 411 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ALG11Q2TAA5 492 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CBWD6Q4V339 395 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SPANXN2Q5MJ10 180 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 STXBP5Q5T5C0 1151 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ANXA8L1Q5VT79 327 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ABRAXAS1Q6UWZ7 409 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PLPPR4Q7Z2D5 763 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ARHGAP22Q7Z5H3 698 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM126BQ8IXS8 530 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 OSBPL11Q9BXB4 747 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 VPS4AQ9UN37 437 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TPST1O60507 370 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 UNC5CO95185 931 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ZCCHC18P0CG32 403 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 YBX3P16989 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 KLRK1P26718 216 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PBLDP30039 288 aaPredicted RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 LRPAP1P30533 357 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 HUNKP57058 714 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 C1orf186Q6ZWK4 172 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 R3HCC1LQ7Z5L2 792 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 RIOX2Q8IUF8 465 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SYT12Q8IV01 421 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM71AQ8IYT1 594 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TCAIMQ8N3R3 496 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 AP3S1Q92572 193 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PRMT6Q96LA8 375 aaPredicted RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 RNPEPL1Q9HAU8 725 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 H3BRB1 525 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 LTFP02788 710 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ASGR1P07306 291 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 GSTM1P09488 218 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ORC1Q13415 861 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 DDX39BQ13838 428 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM92BQ6ZTR7 304 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SPATA19Q7Z5L4 167 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SNX32Q86XE0 403 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TRIT1Q9H3H1 467 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 BLOC1S4Q9NUP1 217 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 RAP2CQ9Y3L5 183 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 MYPNQ86TC9 1320 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 FTH1P02794 183 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SNRPB2P08579 225 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ANXA5P08758 320 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PRDX6P30041 224 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 ADSSP30520 456 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 HNRNPH3P31942 346 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 RPL9P32969 192 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SMARCB1Q12824 385 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 SGCGQ13326 291 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 POU6F1Q14863 301 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 HYIQ5T013 277 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PAGE2Q7Z2X7 111 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 MIB1Q86YT6 1006 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 DEFB106AQ8N104 65 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CACTIN-AS1Q8N1I8 211 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC33Q8N5R6 958 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 BHLHE22Q8NFJ8 381 aaPredicted RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 NMD3Q96D46 503 aaKnown RBP8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 MED8Q96G25 268 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 LRMDAQ9H2I8 198 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 RHBDL2Q9NX52 303 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 PTCH2Q9Y6C5 1203 aa8.48□□□□□ -1.05
SPTLC3-201ENST00000399002 CKMP06732 381 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ALOX5P09917 674 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 COX4I1P13073 169 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 INSRRP14616 1297 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TYMPP19971 482 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ATP4AP20648 1035 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SCNN1BP51168 640 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 NME5P56597 212 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 PLCL1Q15111 1095 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CCDC149Q6ZUS6 474 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 METTL6Q8TCB7 284 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ZKSCAN4Q969J2 545 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 BBS4Q96RK4 519 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RCOR3Q9P2K3 495 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TBC1D30Q9Y2I9 924 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 BCLAF3A2AJT9 711 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms