RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FTH1P19P0C7X4 201 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 KRT3P12035 628 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PTPN9P43378 593 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ADPRHP54922 357 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 GSCP56915 257 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 BNC1Q01954 994 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PTP4A2Q12974 167 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 C15orf59Q2T9L4 293 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 HLA-BQ31612 363 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF783Q6ZMS7 281 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 Q6ZVU0 165 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 STRADAQ7RTN6 431 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 NAXDQ8IW45 347 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 DCAF4L2Q8NA75 395 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ATP11CQ8NB49 1132 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 JOSD2Q8TAC2 188 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 CCDC114Q96M63 670 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PSMB7Q99436 277 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 AGPAT1Q99943 283 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 SELENOOQ9BVL4 669 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ZYG11BQ9C0D3 744 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PPARGC1AQ9UBK2 798 aaKnown RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 TPX2Q9ULW0 747 aaKnown RBP13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 ILVBLA1L0T0 632 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 BNIP3LO60238 219 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 SRCP12931 536 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 FERP16591 822 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 ADRA1BP35368 520 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 DRD3P35462 400 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 CCR5P51681 352 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 CLCN6P51797 869 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 RACK1P63244 317 aaKnown RBP13.73□□□□□ -0.21
VCX3A-202ENST00000398729 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 FILIP1LQ4L180 1135 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
VCX3A-202ENST00000398729 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 ORAI3Q9BRQ5 295 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 IL21RQ9HBE5 538 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 OR12D3Q9UGF7 316 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 PPM1HQ9ULR3 514 aa13.73□□□□□ -0.21
VCX3A-202ENST00000398729 FNDC3AQ9Y2H6 1198 aaKnown RBP13.73□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3IA0A087WXS9 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3EA0A087X179 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SIGLEC16A6NMB1 481 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SLC7A4O43246 635 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 GJB6O95452 261 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 MT-CO1P00395 513 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 GPD1P21695 349 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RFC1P35251 1148 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF165P49910 485 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 C21orf59P57076 290 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 NRG1Q02297 640 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RAB6CQ53S08 254 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 MON1BQ7L1V2 547 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 OR7D4Q8NG98 312 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 PIP4K2CQ8TBX8 421 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SETD7Q8WTS6 366 aaKnown RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 CENPIQ92674 756 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 FAM131CQ96AQ9 280 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 ACE2Q9BYF1 805 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RAB6CQ9H0N0 254 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 OSBPL2Q9H1P3 480 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 CCDC86Q9H6F5 360 aaKnown RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SARDHQ9UL12 918 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 MYO6Q9UM54 1294 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 PCDHGB2Q9Y5G2 931 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 SNX11Q9Y5W9 270 aa13.72□□□□□ -0.21
VCX3A-202ENST00000398729 PLXNA2O75051 1894 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms