RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TCF25Q9BQ70 676 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 A0A096LPK6 155 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 A0A1W2PQH9 124 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 REXO1L1PQ8IX06 675 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 MEIS2O14770 477 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 GNRH1P01148 92 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 VAV1P15498 845 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 SELPP16109 830 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 EPORP19235 508 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CRABP2P29373 138 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 PSMD8P48556 350 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CASP7P55210 303 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 PRKCZQ05513 592 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 BIKQ13323 160 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 FAM151BQ6UXP7 276 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 PIGZQ86VD9 579 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 MTERF3Q96E29 417 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.51□□□□□ -0.57
TTC28-201ENST00000397906 CYP3A4P08684 503 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 DSG1Q02413 1049 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 ACTRT1Q8TDG2 376 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 TRBV23OR9-2A0A075B6M9 112 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 FAM126BQ8IXS8 530 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 C12orf50Q8NA57 414 aaPredicted RBP11.51□□□□□ -0.57
TTC28-201ENST00000397906 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 NCF4Q15080 339 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 GPR156Q8NFN8 814 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 GANQ9H2C0 597 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CCDC167Q9P0B6 97 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 SPATA31C2B4DYI2 1134 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
TTC28-201ENST00000397906 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
TTC28-201ENST00000397906 GLUD2P49448 558 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CCDC153Q494R4 210 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 TCHHL1Q5QJ38 904 aaPredicted RBP11.51□□□□□ -0.57
TTC28-201ENST00000397906 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 ACAT2Q9BWD1 397 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
TTC28-201ENST00000397906 TAS2R14Q9NYV8 317 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SAC3D1A6NKF1 404 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 HACD1B0YJ81 288 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SCAMP1O15126 338 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ZSCAN5DPP0CG00 497 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PLPPR4Q7Z2D5 763 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SLC35C1Q96A29 364 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 GOT1P17174 413 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 NTSP30990 170 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 CYP4Z2PQ8N1L4 340 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SH3GL1Q99961 368 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TM9SF1O15321 606 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PCCBP05166 539 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TLX1P31314 330 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 SRSF11Q05519 484 aaKnown RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 ZNHIT3Q15649 155 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 EPHX4Q8IUS5 362 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 FAM84AQ96KN4 292 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 OR10H1Q9Y4A9 318 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TPP1O14773 563 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ZNF862O60290 1169 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 COMMD8Q9NX08 183 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SMG7Q92540 1137 aaKnown RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 FANCEQ9HB96 536 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 YDJCA8MPS7 323 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PABPC1P11940 636 aaKnown RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 KDELR1P24390 212 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 RNF148Q8N7C7 305 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ZMYM2Q9UBW7 1377 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PECAM1P16284 738 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 TSPAN8P19075 237 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PAGE2BQ5JRK9 111 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 ALLCQ8N6M5 410 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 KCNMB3Q9NPA1 279 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PCDHA3Q9Y5H8 950 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 KIF1AQ12756 1690 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 RGS14O43566 566 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 APODP05090 189 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 OTUD3Q5T2D3 398 aaPredicted RBP11.5□□□□□ -0.57
TTC28-201ENST00000397906 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TBC1D12O60347 775 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 HSDL1Q3SXM5 330 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 CASP12Q6UXS9 341 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 CIDEBQ9UHD4 219 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 INHAP05111 366 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 TM4SF1P30408 202 aa11.5□□□□□ -0.57
TTC28-201ENST00000397906 PPIGQ13427 754 aaKnown RBP eCLIP11.5□□□□□ -0.578e-7■■■□□ 16.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms