RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HOXD8P13378 290 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 LAMTOR4Q0VGL1 99 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM132BQ14DG7 1078 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 POLD3Q15054 466 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RBBP7Q16576 425 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 AMIGO2Q86SJ2 522 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 UNC5BQ8IZJ1 945 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 LZTR1Q8N653 840 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 LEMD2Q8NC56 503 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SLC35F5Q8WV83 523 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 EMID1Q96A84 441 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM143Q96AN5 459 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PIDD1Q9HB75 910 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 EML4Q9HC35 981 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TRPC7Q9HCX4 862 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 FBXO6Q9NRD1 293 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 DKK3Q9UBP4 350 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SBF2Q86WG5 1849 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 INO80B-WBP1J3KQ70 363 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CNOT3O75175 753 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CPOXP36551 454 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GLUD2P49448 558 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TKTL1P51854 596 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 STX5Q13190 355 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 LAMC2Q13753 1193 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TXNRD3NBQ6F5E7 133 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 DENND1BQ6P3S1 775 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CDHR3Q6ZTQ4 885 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 HTR3CQ8WXA8 447 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CDRT15Q96T59 188 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 C6orf62Q9GZU0 229 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ANKRD6Q9Y2G4 727 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TELO2Q9Y4R8 837 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 IPPQ9Y573 584 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 C2orf71A6NGG8 1288 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RAD17O75943 681 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 C6orf222P0C671 652 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC166P0CW27 439 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 IMPDH2P12268 514 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 USP10Q14694 798 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TEX44Q53QW1 395 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 COQ5Q5HYK3 327 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 KBTBD6Q86V97 674 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SNX32Q86XE0 403 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 KYQ8NBH2 561 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SKA2Q8WVK7 121 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PGAP3Q96FM1 320 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RTKNQ9BST9 563 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 EBF3Q9H4W6 596 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 VPS45Q9NRW7 570 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GDAP2Q9NXN4 497 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GOLGA8TH3BQL2 631 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 BUD23O43709 281 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 L1CAMP32004 1257 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 AVPR1AP37288 418 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GRM2Q14416 872 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ARMCX2Q7L311 632 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 FAM172AQ8WUF8 416 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TRIM63Q969Q1 353 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 EFCAB1Q9HAE3 211 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GGA3Q9NZ52 723 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RAP2CQ9Y3L5 183 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GRXCR2A6NFK2 248 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TRMUO75648 421 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 BST2Q10589 180 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TAF5Q15542 800 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SPANXN3Q5MJ09 141 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 POTEHQ6S545 545 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 HACD2Q6Y1H2 254 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 KIAA0319LQ8IZA0 1049 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 OR9Q1Q8NGQ5 310 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ELMO2Q96JJ3 720 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SERAC1Q96JX3 654 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PCYT2Q99447 389 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CPNE1Q99829 537 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 SH2D3AQ9BRG2 576 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TSR3Q9UJK0 312 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CLOCKO15516 846 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 IDH3BO43837 385 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 C22orf31O95567 290 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CD4P01730 458 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CYP3A5P20815 502 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MATKP42679 507 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 BFSP2Q13515 415 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KCTD2Q14681 263 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 GPR107Q5VW38 600 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 MBLAC2Q68D91 279 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 IL31Q6EBC2 164 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CYP4V2Q6ZWL3 525 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 CPSF7Q8N684 471 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 TDRD5Q8NAT2 981 aaKnown RBP5.53□□□□□ -1.52
PTPRD-205ENST00000397611 KCTD13Q8WZ19 329 aa5.53□□□□□ -1.52
PTPRD-205ENST00000397611 FAM162AQ96A26 154 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms