RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 HEPACAM2A8MVW5 462 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 CHADO15335 359 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 TANGO2Q6ICL3 276 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 TEX26Q8N6G2 289 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 LMLNQ96KR4 655 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 SPON2Q9BUD6 331 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 MUC3BQ9H195 1237 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 GBA3Q9H227 469 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 ATP13A1Q9HD20 1204 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 ZNF446Q9NWS9 450 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 DUS2Q9NX74 493 aaKnown RBP28.05■■■□□ 2.08
CPNE1-203ENST00000397442 MARK1Q9P0L2 795 aa28.05■■■□□ 2.08
CPNE1-203ENST00000397442 MTRF1LQ9UGC7 380 aaKnown RBP28.05■■■□□ 2.08
CPNE1-203ENST00000397442 F5H423 210 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-203ENST00000397442 NDC80O14777 642 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 FDFT1P37268 417 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 ETFBP38117 255 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 CSKP41240 450 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 EML3Q32P44 896 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 SYCP2LQ5T4T6 812 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 BBS2Q9BXC9 721 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 TXLNGYQ9BZA5 131 aa28.04■■■□□ 2.08
CPNE1-203ENST00000397442 RBM22Q9NW64 420 aaKnown RBP eCLIP28.04■■■□□ 2.089e-7■■□□□ 12.8
CPNE1-203ENST00000397442 CACNG3O60359 315 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 HLA-DQB2P05538 268 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 NFKB1P19838 968 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 OXCT1P55809 520 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 TNK2Q07912 1038 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 LEKR1Q6ZMV7 388 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 ZCCHC9Q8N567 271 aaKnown RBP28.03■■■□□ 2.08
CPNE1-203ENST00000397442 ZFP14Q9HCL3 533 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 NEDD8-MDP1E9PL57 170 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 ZMPSTE24O75844 475 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 LAMP2P13473 410 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 RENBPP51606 427 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 LMAN2Q12907 356 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 TRIM68Q6AZZ1 485 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 TMC3Q7Z5M5 1100 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 SUSD6Q92537 303 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 ZNF599Q96NL3 588 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 RSPH14Q9UHP6 348 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 ACTL7AQ9Y615 435 aa28.03■■■□□ 2.08
CPNE1-203ENST00000397442 SMAPO00193 183 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 APRTP07741 180 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 TYRP14679 529 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 MARC1Q5VT66 337 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 ITPRIPL1Q6GPH6 555 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 VITQ6UXI7 678 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 OTOP3Q7RTS5 596 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 APCDD1Q8J025 514 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 EXOC4Q96A65 974 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 ATP8A1Q9Y2Q0 1164 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 EYSQ5T1H1 3165 aa28.02■■■□□ 2.08
CPNE1-203ENST00000397442 GOLGA8MH3BSY2 632 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 CYP17A1P05093 508 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 TPSB2P20231 275 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 GBP2P32456 591 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-203ENST00000397442 CD70P32970 193 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 ARF5P84085 180 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 LBRQ14739 615 aaKnown RBP28.01■■■□□ 2.07
CPNE1-203ENST00000397442 DHCR24Q15392 516 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 TPSAB1Q15661 275 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 TMCO4Q5TGY1 634 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 ASTLQ6HA08 431 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-203ENST00000397442 ZFYVE19Q96K21 471 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 FAM83CQ9BQN1 747 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 GLOD4Q9HC38 313 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 KIAA1522Q9P206 1035 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-203ENST00000397442 CD207Q9UJ71 328 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 VPS28Q9UK41 221 aa28.01■■■□□ 2.07
CPNE1-203ENST00000397442 USP15Q9Y4E8 981 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-203ENST00000397442 CBX4O00257 560 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 SNAP91O60641 907 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 PPFIA2O75334 1257 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 CD160O95971 181 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 HLA-FP30511 346 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 MMP13P45452 471 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 IFNAR2P48551 515 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 DHX9Q08211 1270 aaKnown RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 KLHDC8BQ8IXV7 354 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 NECTIN4Q96NY8 510 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 PLA2G2FQ9BZM2 168 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 FOXP3Q9BZS1 431 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 INTS6Q9UL03 887 aaKnown RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 HPCAL4Q9UM19 191 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 ARSAP15289 507 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 HSPA9P38646 679 aaKnown RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 PLK1P53350 603 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 FCHO2Q0JRZ9 810 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 CCDC117Q8IWD4 279 aaPredicted RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 PGBD5Q8N414 524 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 MREGQ8N565 214 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 PDCD7Q8N8D1 485 aaKnown RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 DCAF4L2Q8NA75 395 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 NSMCE1Q8WV22 266 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 E2F7Q96AV8 911 aa28■■■□□ 2.07
CPNE1-203ENST00000397442 MLPHQ9BV36 600 aaPredicted RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 EIF2B3Q9NR50 452 aaKnown RBP28■■■□□ 2.07
CPNE1-203ENST00000397442 H3BQ06 376 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-203ENST00000397442 TNNT3P45378 269 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms