RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RAB11FIP2Q7L804 512 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 CARNMT1Q8N4J0 409 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 TMEM145Q8NBT3 493 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 FBXL13Q8NEE6 735 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 C9orf43Q8TAL5 461 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 MYEOVQ96EZ4 313 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 PAGE5Q96GU1 130 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 SPAG5Q96R06 1193 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 RAB20Q9NX57 234 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 PISDQ9UG56 409 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 ACSL6Q9UKU0 697 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 ITPR3Q14573 2671 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 LRBAP50851 2863 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 O00370 1275 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 CASC3O15234 703 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 VPS4BO75351 444 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 GABBR2O75899 941 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 LTFP02788 710 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 MYL1P05976 194 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 KRT7P08729 469 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 JMJD7P0C870 316 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 VDRP11473 427 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 HGFP14210 728 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 UQCRFS1P47985 274 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 CD97P48960 835 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 MXI1P50539 228 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 EIF3IQ13347 325 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 SLC12A1Q13621 1099 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 NR0B2Q15466 257 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 DCAF6Q58WW2 860 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 ZNF542PQ5EBM4 170 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 PERM1Q5SV97 790 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 FAM46CQ5VWP2 391 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 APCDD1Q8J025 514 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 WDR48Q8TAF3 677 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 FRS2Q8WU20 508 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 SLC35F5Q8WV83 523 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 UBE2Q2Q8WVN8 375 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 SLC39A13Q96H72 371 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 RPL10LQ96L21 214 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 FCRL2Q96LA5 508 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 NUCKS1Q9H1E3 243 aaKnown RBP9.69□□□□□ -0.86
NEDD9-203ENST00000397378 PREBQ9HCU5 417 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 DNAJC28Q9NX36 388 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 NCKIPSDQ9NZQ3 722 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 KIAA1257Q9ULG3 409 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 VPS4AQ9UN37 437 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 TLR6Q9Y2C9 796 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 CEP83Q9Y592 693 aa9.69□□□□□ -0.86
NEDD9-203ENST00000397378 EME2A4GXA9 379 aaPredicted RBP9.68□□□□□ -0.86
NEDD9-203ENST00000397378 AGRPO00253 132 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
NEDD9-203ENST00000397378 MUSKO15146 869 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 ALOX15BO15296 676 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SLC31A1O15431 190 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 STX10O60499 249 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 RNF224P0DH78 156 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 LCP1P13796 627 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 CD19P15391 556 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 VAV1P15498 845 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 STK19P49842 368 aaPredicted RBP9.68□□□□□ -0.86
NEDD9-203ENST00000397378 PLK1P53350 603 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 METAP1P53582 386 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 HNRNPKP61978 463 aaKnown RBP eCLIP9.68□□□□□ -0.861e-6■■□□□ 11.4
NEDD9-203ENST00000397378 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SULT2A1Q06520 285 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 ADAM9Q13443 819 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 AGBL4Q5VU57 503 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 LCLAT1Q6UWP7 414 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 ZFAND4Q86XD8 727 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 CFAP52Q8N1V2 620 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 OR8D1Q8WZ84 308 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SERPINB11Q96P15 392 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 STRADBQ9C0K7 418 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SARDHQ9UL12 918 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 COQ4Q9Y3A0 265 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SPENQ96T58 3664 aaKnown RBP9.68□□□□□ -0.86
NEDD9-203ENST00000397378 UNC13CQ8NB66 2214 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
NEDD9-203ENST00000397378 CRYBG3Q68DQ2 2970 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 PRAMEF33A0A0G2JMD5 474 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 C1QTNF3-AMACRE9PGA6 284 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 NVLO15381 856 aaKnown RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 PRAMEF10O60809 474 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 FBXO21O94952 628 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 RHOBTB3O94955 611 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 FYNP06241 537 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 PRLRP16471 622 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 ITIH1P19827 911 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms