RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 SP9P0CG40 484 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 GLDCP23378 1020 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 HOXA6P31267 233 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 SERPINH1P50454 418 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 PTPN5P54829 565 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 COPS2P61201 443 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 PAFAH1B3Q15102 231 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 AFMIDQ63HM1 303 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 HEATR6Q6AI08 1181 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 ZC3H14Q6PJT7 736 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 SPOCD1Q6ZMY3 1216 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 NPWQ8N729 165 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 KRT35Q92764 455 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 MYO19Q96H55 970 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 CEP44Q9C0F1 390 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 ETNK2Q9NVF9 386 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 POLR3BQ9NW08 1133 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 C2orf42Q9NWW7 574 aa13.95□□□□□ -0.18
GAPDH-204ENST00000396859 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 MUC22E2RYF6 1773 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-204ENST00000396859 CCDC163A0A0D9SF12 145 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 C3orf70A6NLC5 250 aaPredicted RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 AXIN1O15169 862 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 BNIP3LO60238 219 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 PRAMEF11O60813 436 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 SIN3BO75182 1162 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 MT-CO1P00395 513 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 ACADMP11310 421 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 MX2P20592 715 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 COL9A1P20849 921 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 CDKN2BP42772 138 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 DNA2P51530 1060 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 ARF5P84085 180 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 IL10RBQ08334 325 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 SFSWAPQ12872 951 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 BYSLQ13895 437 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 KAZNQ674X7 775 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 KIAA1211LQ6NV74 962 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 C22orf39Q6P5X5 142 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 KIAA1324Q6UXG2 1013 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 LONP2Q86WA8 852 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 ARHGAP12Q8IWW6 846 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 MAML2Q8IZL2 1156 aaPredicted RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 BBS5Q8N3I7 341 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 PCDH20Q8N6Y1 951 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 OR2T3Q8NH03 318 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 OR8D1Q8WZ84 308 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 PRCCQ92733 491 aaPredicted RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 ERLEC1Q96DZ1 483 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 KLC2Q9H0B6 622 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 PRSS16Q9NQE7 514 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 HAUS2Q9NVX0 235 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 ZSCAN32Q9NX65 697 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 EBF1Q9UH73 591 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 RAPGEFL1Q9UHV5 662 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 IPO11Q9UI26 975 aaKnown RBP13.94□□□□□ -0.18
GAPDH-204ENST00000396859 MFHAS1Q9Y4C4 1052 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 HEY1Q9Y5J3 304 aa13.94□□□□□ -0.18
GAPDH-204ENST00000396859 H0Y858 1186 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 MFSD11O43934 449 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 KIF5CO60282 957 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 NEBLO76041 1014 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 GABRG2P18507 467 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 PXNP49023 591 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 FNTBP49356 437 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 DYNLT1P63172 113 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 ELAVL3Q14576 367 aaKnown RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 RFTN1Q14699 578 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 RPS6KA1Q15418 735 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 USP39Q53GS9 565 aaKnown RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 TMCO4Q5TGY1 634 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 ZNF776Q68DI1 518 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 LEKR1Q6ZMV7 388 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 Q6ZVU0 165 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 TMPRSS6Q8IU80 811 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 PQLC3Q8N755 202 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 MDGA1Q8NFP4 955 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 FRS2Q8WU20 508 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 PTPRN2Q92932 1015 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 ISG20Q96AZ6 181 aaKnown RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 SIPA1Q96FS4 1042 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 SPACA7Q96KW9 195 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 ZNF599Q96NL3 588 aa13.93□□□□□ -0.18
GAPDH-204ENST00000396859 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
GAPDH-204ENST00000396859 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms