RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ARHGEF19Q8IW93 802 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 TRIM59Q8IWR1 403 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 PPP1R16AQ96I34 528 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 HIC2Q96JB3 615 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 ABCG4Q9H172 646 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 RRN3Q9NYV6 651 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 PAXBP1Q9Y5B6 917 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 A0A1W2PQU0 124 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 SLC31A1O15431 190 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 THAP12O43422 761 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 PIAS2O75928 621 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 AFPP02771 609 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 GNA15P30679 374 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 METAP1P53582 386 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 TAS2R38P59533 333 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 ZNF284Q2VY69 593 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 TTI2Q6NXR4 508 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 IGF2-ASQ6U949 168 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 ABI3BPQ7Z7G0 1075 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 COL26A1Q96A83 441 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 HDAC8Q9BY41 377 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 MUC3BQ9H195 1237 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 POLR1BQ9H9Y6 1135 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 UBE2TQ9NPD8 197 aaPredicted RBP17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 THSD1Q9NS62 852 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 HS3ST3A1Q9Y663 406 aa17.95■□□□□ 0.46
EXOSC3-202ENST00000396521 SHROOM3Q8TF72 1996 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 KPNA3O00505 521 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 SCAMP1O15126 338 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 LZTS3O60299 673 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 CHRNA3P32297 505 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 RECQLP46063 649 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 TAF1BQ53T94 588 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 SETD3Q86TU7 594 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 CIR1Q86X95 450 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 DEFB106AQ8N104 65 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 ATP11CQ8NB49 1132 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 CCDC97Q96F63 343 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 PPP1R13BQ96KQ4 1090 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 INTS2Q9H0H0 1204 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 VANGL2Q9ULK5 521 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 CSNK1G3Q9Y6M4 447 aa17.94■□□□□ 0.46
EXOSC3-202ENST00000396521 A6NNZ2 444 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 CALCAP01258 141 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 SRCP12931 536 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 NOS2P35228 1153 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 SLC20A2Q08357 652 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 C11orf57Q6ZUT1 292 aaPredicted RBP17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 ERN2Q76MJ5 926 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 ZDHHC17Q8IUH5 632 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 OR2A12Q8NGT7 310 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 SNRNP27Q8WVK2 155 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 APOLD1Q96LR9 279 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 CALN1Q9BXU9 219 aa17.93■□□□□ 0.46
EXOSC3-202ENST00000396521 MGAQ8IWI9 3026 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 H3BM21 787 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 BNIP3LO60238 219 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 USP12O75317 370 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 PAGE1O75459 146 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 PCDH8O95206 1070 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 F9P00740 461 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 PRLRP16471 622 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 RPS21P63220 83 aaKnown RBP17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 GABREP78334 506 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 PITX1P78337 314 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 TAF5Q15542 800 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 POM121L1PQ3SYA9 428 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 BRMS1LQ5PSV4 323 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 KIAA1161Q6NSJ0 714 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 ZCCHC8Q6NZY4 707 aaKnown RBP17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 LRRC31Q6UY01 552 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 DCAF4L2Q8NA75 395 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 OR13H1Q8NG92 308 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 KCNE4Q8WWG9 221 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 FEM1CQ96JP0 617 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 C1orf74Q96LT6 269 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 UCKL1Q9NWZ5 548 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 PCDHGC3Q9UN70 934 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 HS3ST4Q9Y661 456 aa17.92■□□□□ 0.46
EXOSC3-202ENST00000396521 CXorf51AA0A1B0GTR3 108 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 J3QKU1 62 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 FFAR2O15552 330 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 CSO75390 466 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 MPOP05164 745 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 RHOCP08134 193 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 GIMD1P0DJR0 217 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 MLLT3P42568 568 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 RABIFP47224 123 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 CENPCQ03188 943 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 NME3Q13232 169 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 TMEM259Q4ZIN3 620 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 RETSATQ6NUM9 610 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 ZNF783Q6ZMS7 281 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 SLC26A9Q7LBE3 791 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 TMC6Q7Z403 805 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 C1orf131Q8NDD1 294 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms