RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 FAM133BQ5BKY9 247 aaKnown RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 FYB2Q5VWT5 728 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF449Q6P9G9 518 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 UMODL1-AS1Q8N2C9 162 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 PTPRN2Q92932 1015 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 MFSD3Q96ES6 412 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ATP11BQ9Y2G3 1177 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 FAM237BA0A1B0GVD1 139 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 MAGEB16A2A368 324 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 BGNP21810 368 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 GP5P40197 560 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 NDST2P52849 883 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 SLC8B1Q6J4K2 584 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 FBXL22Q6P050 247 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 ARMC2Q8NEN0 867 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 CPNE1Q99829 537 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 CWH43Q9H720 699 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 CHRAC1Q9NRG0 131 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 TPP1O14773 563 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 GEMP55040 296 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 KLHDC8BQ8IXV7 354 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 IGSF8Q969P0 613 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 IGSF21Q96ID5 467 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
ITGB1-202ENST00000396033 PPP1R2P1Q96PQ5 205 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 VN1R3Q9BXE9 311 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 HAUS2Q9NVX0 235 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
ITGB1-202ENST00000396033 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CDC25CP30307 473 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 PDE1BQ01064 536 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CIR1Q86X95 450 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 EGFL6Q8IUX8 553 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 FSD1LQ9BXM9 530 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 UBE2OQ9C0C9 1292 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 SP110Q9HB58 689 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 IGLV3-10A0A075B6K4 115 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CCDC78A2IDD5 438 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 ALDOAP04075 364 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CRHR1P34998 444 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 SATB1Q01826 763 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 RING1Q06587 406 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CYB5D1Q6P9G0 228 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 KCNMB4Q86W47 210 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 NACA2Q9H009 215 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 C20orf96Q9NUD7 363 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 BACE2Q9Y5Z0 518 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 CHUKO15111 745 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 PMPCBO75439 489 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 UBOX5O94941 541 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 TOP3BO95985 862 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 DNAJB2P25686 324 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 TUFMP49411 452 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 HSP90AA5PQ58FG0 334 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 GRTP1Q5TC63 336 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 PABPC5Q96DU9 382 aaKnown RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF512Q96ME7 567 aaPredicted RBP12.35□□□□□ -0.43
ITGB1-202ENST00000396033 NPHS2Q9NP85 383 aa12.35□□□□□ -0.43
ITGB1-202ENST00000396033 TROVE2P10155 538 aaKnown RBP eCLIP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 NMBRP28336 390 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 KPNA1P52294 538 aaPredicted RBP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 STRA8Q7Z7C7 330 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 ATXN7L3BQ96GX2 97 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 MECRQ9BV79 373 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 TBX21Q9UL17 535 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 SLC12A4Q9UP95 1085 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 J3KR12 359 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 EFEMP2O95967 443 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 GSTA1P08263 222 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 OVGP1Q12889 678 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 POU6F1Q14863 301 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 GBP7Q8N8V2 638 aaPredicted RBP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 NT5MQ9NPB1 228 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 USH1CQ9Y6N9 552 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 RAMP2O60895 175 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 F7P08709 466 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms