RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CPQQ9Y646 472 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 SLC12A8A0AV02 714 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 FGF10O15520 208 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 PFKLP17858 780 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 PARP6Q2NL67 630 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 FAXCQ5TGI0 409 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 ADGRD1Q6QNK2 874 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 ARID3BQ8IVW6 561 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 KLHDC8BQ8IXV7 354 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 LRRN4Q8WUT4 740 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 SSU72Q9NP77 194 aaKnown RBP15.45■□□□□ 0.06
SCAF11-204ENST00000395454 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 CDH7Q9ULB5 785 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 CHMP2BQ9UQN3 213 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 TLR6Q9Y2C9 796 aa15.45■□□□□ 0.06
SCAF11-204ENST00000395454 DENND4AQ7Z401 1863 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 TCRBV9S1A1TA0A576 114 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 GMNCA6NCL1 334 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 FAM155BO75949 473 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 GARSP41250 739 aaKnown RBP15.44■□□□□ 0.06
SCAF11-204ENST00000395454 LEXMQ3ZCV2 418 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 CYS1Q717R9 158 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 NLRP14Q86W24 1093 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 PALM2Q8IXS6 379 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 FBF1Q8TES7 1133 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 MZB1Q8WU39 189 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 RNF34Q969K3 372 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 SIGLEC10Q96LC7 697 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 C1orf74Q96LT6 269 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 ZNF317Q96PQ6 595 aaPredicted RBP15.44■□□□□ 0.06
SCAF11-204ENST00000395454 MYADMQ96S97 322 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 CYTH2Q99418 400 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 VAT1Q99536 393 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 SELENOSQ9BQE4 189 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 GKN1Q9NS71 199 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 CCL26Q9Y258 94 aa15.44■□□□□ 0.06
SCAF11-204ENST00000395454 TMEM120BA0PK00 339 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SOBPA7XYQ1 873 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PAGE1O75459 146 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PRAMEF12O95522 483 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 IRF1P10914 325 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 CREB1P16220 341 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 EPHB2P29323 1055 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SLC7A9P82251 487 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 COG7P83436 770 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ZXDBP98169 803 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 AP1B1Q10567 949 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SKIDA1Q1XH10 827 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PTCRAQ6ISU1 281 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TP53INP2Q8IXH6 220 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ZNF567Q8N184 647 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ST13P5Q8NFI4 369 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TSGA13Q96PP4 275 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 CCT8L2Q96SF2 557 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TDP1Q9NUW8 608 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 INTS9Q9NV88 658 aaKnown RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SHROOM3Q8TF72 1996 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 WASH4PA8MWX3 477 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TRDMT1O14717 391 aaKnown RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PRPF4O43172 522 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 AVILO75366 819 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SUN1O94901 812 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SLC2A3P11169 496 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 BRAFP15056 766 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PRKCHP24723 683 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PTPN3P26045 913 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 STX2P32856 288 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 HNRNPH2P55795 449 aaKnown RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TBX4P57082 545 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 FAM78AQ5JUQ0 283 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 AFMIDQ63HM1 303 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 STEAP4Q687X5 459 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 LZTR1Q8N653 840 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 DCAKDQ8WVC6 231 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 USP13Q92995 863 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ZFRQ96KR1 1074 aaKnown RBP15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ASB16Q96NS5 453 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 PAFAH2Q99487 392 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TRHDEQ9UKU6 1024 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 ARHGAP26Q9UNA1 814 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 TTLL3Q9Y4R7 772 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 SNX10Q9Y5X0 201 aa15.43■□□□□ 0.06
SCAF11-204ENST00000395454 MUC3AQ02505 3323 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 RASA4BC9J798 803 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 NDUFAB1O14561 156 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 RASA4O43374 803 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 SEC24CP53992 1094 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 SARNPP82979 210 aaKnown RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 MPP2Q14168 576 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 TMED2Q15363 201 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 SMAD2Q15796 467 aaKnown RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 LRRC8BQ6P9F7 803 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 OTOP3Q7RTS5 596 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 SLC44A1Q8WWI5 657 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 SMARCD2Q92925 531 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 FCRL2Q96LA5 508 aaPredicted RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 EBNA1BP2Q99848 306 aaKnown RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 KLF16Q9BXK1 252 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms