RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 FBXL22Q6P050 247 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 DENND1BQ6P3S1 775 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 SLC46A1Q96NT5 459 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 NT5C1BQ96P26 610 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 FEM1AQ9BSK4 669 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 ABCG4Q9H172 646 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 GPR27Q9NS67 375 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 ENTPD2Q9Y5L3 495 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 CASC3O15234 703 aaKnown RBP16.23■□□□□ 0.19
SNCA-205ENST00000394991 GGCXP38435 758 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 PRCPP42785 496 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 FMO5P49326 533 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 CDKN3Q16667 212 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 NEK5Q6P3R8 708 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 GUSBP11Q6P575 273 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 ARHGEF19Q8IW93 802 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 PPM1KQ8N3J5 372 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 ZNF548Q8NEK5 533 aaPredicted RBP16.23■□□□□ 0.19
SNCA-205ENST00000394991 LMO3Q8TAP4 145 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 BMFQ96LC9 184 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 DUSP23Q9BVJ7 150 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 SLC4A5Q9BY07 1137 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNCA-205ENST00000394991 DNAJC28Q9NX36 388 aa16.23■□□□□ 0.19
SNCA-205ENST00000394991 ARMCX3Q9UH62 379 aaPredicted RBP16.23■□□□□ 0.19
SNCA-205ENST00000394991 CPED1A4D0V7 1026 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 TRIM49BA6NDI0 452 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 CDRT15L2A8MXV6 281 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 E5RJQ4 531 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
SNCA-205ENST00000394991 MT-CO1P00395 513 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 SRCP12931 536 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 RBMS1P29558 406 aaKnown RBP16.22■□□□□ 0.19
SNCA-205ENST00000394991 CHRNA3P32297 505 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 ACADSBP45954 432 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 OXCT1P55809 520 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 CLN3Q13286 438 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 FGL2Q14314 439 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 FZD2Q14332 565 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 TAF5Q15542 800 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 TMEM259Q4ZIN3 620 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 CRTC1Q6UUV9 634 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 Q6ZSR6 202 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 EFL1Q7Z2Z2 1120 aaKnown RBP16.22■□□□□ 0.19
SNCA-205ENST00000394991 PTAR1Q7Z6K3 402 aaPredicted RBP16.22■□□□□ 0.19
SNCA-205ENST00000394991 OR2A12Q8NGT7 310 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 RPRD1AQ96P16 312 aaPredicted RBP16.22■□□□□ 0.19
SNCA-205ENST00000394991 POPDC2Q9HBU9 364 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 KLF15Q9UIH9 416 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 VPS28Q9UK41 221 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 HS3ST2Q9Y278 367 aa16.22■□□□□ 0.19
SNCA-205ENST00000394991 POM121BA6NF01 834 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 A6NNZ2 444 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 K7ERQ8 282 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 SNAP91O60641 907 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 PCDH8O95206 1070 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 HNRNPKP61978 463 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNCA-205ENST00000394991 YWHAZP63104 245 aaKnown RBP16.21■□□□□ 0.19
SNCA-205ENST00000394991 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
SNCA-205ENST00000394991 AUHQ13825 339 aaKnown RBP16.21■□□□□ 0.19
SNCA-205ENST00000394991 DRAP1Q14919 205 aaPredicted RBP16.21■□□□□ 0.19
SNCA-205ENST00000394991 TPRG1LQ5T0D9 272 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 ZCCHC8Q6NZY4 707 aaKnown RBP16.21■□□□□ 0.19
SNCA-205ENST00000394991 CCDC81Q6ZN84 652 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 PRICKLE2Q7Z3G6 844 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 EXD3Q8N9H8 876 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 CHST14Q8NCH0 376 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 KREMEN1Q96MU8 473 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 PSMB7Q99436 277 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 TSG101Q99816 390 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 TRIM62Q9BVG3 475 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 TRIM4Q9C037 500 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 VANGL2Q9ULK5 521 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 PCDHGA8Q9Y5G5 932 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 BOD1L1Q8NFC6 3051 aa16.21■□□□□ 0.19
SNCA-205ENST00000394991 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 RAD51BO15315 384 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 SMAD6O43541 496 aaKnown RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 CSF2P04141 144 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 NME1P15531 152 aaKnown RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 PDX1P52945 283 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 ZNF177Q13360 481 aaPredicted RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 PNOCQ13519 176 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 PERM1Q5SV97 790 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 KYAT3Q6YP21 454 aaKnown RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 C14orf80Q86SX3 495 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 CLEC14AQ86T13 490 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 TMEM110Q86TL2 294 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms