RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ZFRQ96KR1 1074 aaKnown RBP19.41■□□□□ 0.7
CLDND1-203ENST00000394181 ZNF317Q96PQ6 595 aaPredicted RBP19.41■□□□□ 0.7
CLDND1-203ENST00000394181 LRRC40Q9H9A6 602 aa19.41■□□□□ 0.7
CLDND1-203ENST00000394181 NT5MQ9NPB1 228 aa19.41■□□□□ 0.7
CLDND1-203ENST00000394181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLDND1-203ENST00000394181 CCDC78A2IDD5 438 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 HMX2A2RU54 273 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 FAM47DPA6NHR8 397 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ERI2A8K979 691 aaKnown RBP19.4■□□□□ 0.7
CLDND1-203ENST00000394181 HIDE1A8MVS5 230 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 H3BNC9 293 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 TYROBPO43914 113 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ERVK-10P10266 1014 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 SLC11A2P49281 568 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 HNRNPH2P55795 449 aaKnown RBP19.4■□□□□ 0.7
CLDND1-203ENST00000394181 BMPR2Q13873 1038 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 TAX1BP1Q86VP1 789 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ARL14EPQ8N8R7 260 aaPredicted RBP19.4■□□□□ 0.7
CLDND1-203ENST00000394181 DENND1AQ8TEH3 1009 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ZNF473Q8WTR7 871 aaKnown RBP19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ATXN3LQ9H3M9 355 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 CHRAC1Q9NRG0 131 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 RPS6KL1Q9Y6S9 549 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ETFBP38117 255 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 SF3A3Q12874 501 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLDND1-203ENST00000394181 SERINC3Q13530 473 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 SLC1A5Q15758 541 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 C5orf22Q49AR2 442 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 DENND5AQ6IQ26 1287 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 LILRA6Q6PI73 481 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 LRRC49Q8IUZ0 686 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 PGBD5Q8N414 524 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 TTC16Q8NEE8 873 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ZNF778Q96MU6 729 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 GRID1Q9ULK0 1009 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 PSAT1Q9Y617 370 aa19.4■□□□□ 0.7
CLDND1-203ENST00000394181 ALPK3Q96L96 1907 aa19.39■□□□□ 0.7
CLDND1-203ENST00000394181 FAM107AO95990 144 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 CYP4F8P98187 520 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 NIPAL4Q0D2K0 466 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 SH2D5Q6ZV89 423 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 GAREM2Q75VX8 874 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 ADAMTS19Q8TE59 1207 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 DYDC1Q8WWB3 177 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 PLD4Q96BZ4 506 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 MFSD3Q96ES6 412 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 RAD9AQ99638 391 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 TCF25Q9BQ70 676 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 FICDQ9BVA6 458 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 SP110Q9HB58 689 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 BFARQ9NZS9 450 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 TRIM49D1C9J1S8 452 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 PRPF4O43172 522 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLDND1-203ENST00000394181 TLL1O43897 1013 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 MBL2P11226 248 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-203ENST00000394181 GJA1P17302 382 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 DRD4P21917 467 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 HNRNPDQ14103 355 aaKnown RBP19.39■□□□□ 0.69
CLDND1-203ENST00000394181 MARC1Q5VT66 337 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 LRRC34Q8IZ02 419 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 OR7D4Q8NG98 312 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 CHMP6Q96FZ7 201 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 MRGPRX2Q96LB1 330 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 PAIP2Q9BPZ3 127 aaKnown RBP19.39■□□□□ 0.69
CLDND1-203ENST00000394181 TBL1YQ9BQ87 522 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 NKIRAS1Q9NYS0 192 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 SAMD15Q9P1V8 674 aa19.39■□□□□ 0.69
CLDND1-203ENST00000394181 AAR2Q9Y312 384 aaKnown RBP19.39■□□□□ 0.69
CLDND1-203ENST00000394181 PLXNA4Q9HCM2 1894 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 IQANK1A0A1B0GTG1 560 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 NEBLO76041 1014 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 MT-ND3P03897 115 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 PYGBP11216 843 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 MYOGP15173 224 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 CA4P22748 312 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 GLDCP23378 1020 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 ADRA1AP35348 466 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 CHRNA4P43681 627 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 DSC2Q02487 901 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 ITKQ08881 620 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 PCSK7Q16549 785 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 GLIPR1L2Q4G1C9 344 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 ATP2A3Q93084 1043 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 ZNF669Q96BR6 464 aaPredicted RBP19.38■□□□□ 0.69
CLDND1-203ENST00000394181 SENP1Q9P0U3 644 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
CLDND1-203ENST00000394181 ANAPC1Q9H1A4 1944 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 ZCWPW2A0A1B0GU75 182 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 SRRM3A6NNA2 597 aaPredicted RBP19.37■□□□□ 0.69
CLDND1-203ENST00000394181 MUSKO15146 869 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 POLBP06746 335 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 GABRR2P28476 465 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 FOXN2P32314 431 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 MAPKAPK2P49137 400 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 RENBPP51606 427 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
CLDND1-203ENST00000394181 ANO4Q32M45 955 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 PARP15Q460N3 678 aa19.37■□□□□ 0.69
CLDND1-203ENST00000394181 STXBP5Q5T5C0 1151 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms