RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ARID5BQ14865 1188 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC18A3Q16572 532 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ERMARDQ5T6L9 678 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 DCAF12L1Q5VU92 463 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 C22orf39Q6P5X5 142 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC36A4Q6YBV0 504 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 METTL3Q86U44 580 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TP53INP2Q8IXH6 220 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 RGL4Q8IZJ4 473 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 HDDC3Q8N4P3 179 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 RTL3Q8N8U3 475 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TC2NQ8N9U0 490 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 KDM1BQ8NB78 822 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR6K2Q8NGY2 324 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF564Q8TBZ8 553 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 FNIP1Q8TF40 1166 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SNX19Q92543 992 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARHGEF2Q92974 986 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 HMCESQ96FZ2 354 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACE2Q9BYF1 805 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 MIR1-1HGQ9H1L0 117 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 OSGEPQ9NPF4 335 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 KLHL11Q9NVR0 708 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMEM51Q9NW97 253 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNHIT6Q9NWK9 470 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 FBXL12Q9NXK8 326 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 CTTNBP2NLQ9P2B4 639 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 PILRBQ9UKJ0 227 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TFR2Q9UP52 801 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 HS3ST2Q9Y278 367 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 PCDHGA5Q9Y5G8 931 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 GVINP1Q7Z2Y8 2422 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SSU72P8A0A1W2PR75 194 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 LNP1A1A4G5 178 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 RASA4BC9J798 803 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 RASA4O43374 803 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 RNASEH1O60930 286 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 LRP3O75074 770 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 FSBPO95073 299 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 SEMA4FO95754 770 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 IGLV3-19P01714 112 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CFIP05156 583 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CD48P09326 243 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 RARAP10276 462 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 DESP17661 470 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 OXTRP30559 389 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 DRD3P35462 400 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAPK8P45983 427 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 SERPINH1P50454 418 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 DNA2P51530 1060 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 AIF1P55008 147 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 TAS2R40P59535 323 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 IRX4P78413 519 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC25A11Q02978 314 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 LMNB2Q03252 620 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ELAVL3Q14576 367 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 POLD3Q15054 466 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 TTC31Q49AM3 519 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 TRIM61Q5EBN2 209 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ATXN7L2Q5T6C5 722 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ACBD5Q5T8D3 534 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 LAYNQ6UX15 382 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZNF783Q6ZMS7 281 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 DPY19L3Q6ZPD9 716 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARHGAP36Q6ZRI8 547 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 RFX8Q6ZV50 586 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 SYT12Q8IV01 421 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CNGA4Q8IV77 575 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZCCHC9Q8N567 271 aaKnown RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 NPWQ8N729 165 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR2A12Q8NGT7 310 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR2I1PQ8NGU4 316 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 PIP4K2CQ8TBX8 421 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CTNNBL1Q8WYA6 563 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 OR8D1Q8WZ84 308 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARRDC3Q96B67 414 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZNF419Q96HQ0 510 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 EXOC2Q96KP1 924 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CCDC42Q96M95 316 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 PPP1R9BQ96SB3 815 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 OMDQ99983 421 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 EDEM2Q9BV94 578 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 TM6SF2Q9BZW4 377 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 BTBD1Q9H0C5 482 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 NEUROG2Q9H2A3 272 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 FBRSQ9HAH7 460 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 ETNK2Q9NVF9 386 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 CKAP5Q14008 2032 aa7.83□□□□□ -1.16
HMGB3P1-201ENST00000393368 EP300Q09472 2414 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 DCDC2BA2VCK2 349 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 METTL12A8MUP2 240 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 J3KR12 359 aa7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 KPNA3O00505 521 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
HMGB3P1-201ENST00000393368 MCF2LO15068 1137 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms