RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 HUS1O60921 280 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LTFP02788 710 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HSMCR30P0CW71 290 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DBTP11182 482 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PSMB4P28070 264 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CDH13P55290 713 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SAMD4BQ5PRF9 694 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KBTBD6Q86V97 674 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PHF13Q86YI8 300 aaPredicted RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZC3H3Q8IXZ2 948 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 URGCPQ8TCY9 931 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DDX1Q92499 740 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SPAG4Q9NPE6 437 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EXD2Q9NVH0 621 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HACD3Q9P035 362 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SIRPGQ9P1W8 387 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 U3KQV3 271 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SLC26A4O43511 780 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DGAT1O75907 488 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ATE1O95260 518 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ADORA2AP29274 412 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GTF2BQ00403 316 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SCIMPQ6UWF3 145 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PGAM4Q8N0Y7 254 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 OR9I1Q8NGQ6 314 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HIPK3Q9H422 1215 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TBCCD1Q9NVR7 557 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 OAZ3Q9UMX2 235 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PMF1-BGLAPU3KQ54 211 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NALCNQ8IZF0 1738 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CLDN25C9JDP6 229 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NRP1O14786 923 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TADA2AO75478 443 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 METTL18O95568 372 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FUCA1P04066 466 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ACAT1P24752 427 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZNF460Q14592 562 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 POU6F1Q14863 301 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZACNQ401N2 412 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DCDC5Q6ZRR9 648 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C9orf16Q9BUW7 83 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TRPV5Q9NQA5 729 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ACOT9Q9Y305 439 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TOPAZ1Q8N9V7 1692 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TRPC5OSA6NMA1 111 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TBX1O43435 398 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CCNKO75909 580 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TNFSF9P41273 254 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PRKAA2P54646 552 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 STILQ15468 1287 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PIWIL3Q7Z3Z3 882 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RAB44Q7Z6P3 723 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BSNDQ8WZ55 320 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CPXM1Q96SM3 734 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ENTPD7Q9NQZ7 604 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SYBUQ9NX95 663 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NCKIPSDQ9NZQ3 722 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NEMP2A6NFY4 417 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ITGB3P05106 788 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GSNP06396 782 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PTPN7P35236 360 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EMC2Q15006 297 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MAPRE1Q15691 268 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FBXO48Q5FWF7 155 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RNF111Q6ZNA4 994 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NEK10Q6ZWH5 1172 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FLCNQ8NFG4 579 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MAPK15Q8TD08 544 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 XPR1Q9UBH6 696 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EPHX2P34913 555 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NR4A2P43354 598 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BAATQ14032 418 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BOLA3Q53S33 107 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 AGAP2Q99490 1192 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CNPY3Q9BT09 278 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SNX9Q9Y5X1 595 aa17.24■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ADGRG6Q86SQ4 1221 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TFAP2BQ92481 460 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RNF157Q96PX1 679 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TEX264Q9Y6I9 313 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HTRA2O43464 458 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 B4GAT1O43505 415 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HS6ST1O60243 411 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PMPCBO75439 489 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NCSTNQ92542 709 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RORBQ92753 470 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PCDHGC3Q9UN70 934 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NCF1BA6NI72 391 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms