RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 IGHV4-34P06331 123 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 FAM228BP0C875 321 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 MYBL1P10243 752 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 GOT1P17174 413 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 ENGP17813 658 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 ACVRL1P37023 503 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 METAP1P53582 386 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 ARF5P84085 180 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 BNC1Q01954 994 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 SFSWAPQ12872 951 aaKnown RBP11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 Q6ZVU0 165 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 CPLX3Q8WVH0 158 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 ARHGEF2Q92974 986 aaKnown RBP11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 VOPP1Q96AW1 172 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 BIRC7Q96CA5 298 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 PEBP4Q96S96 227 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 MAGEH1Q9H213 219 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 ARHGAP20Q9P2F6 1191 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 CNOT8Q9UFF9 292 aaKnown RBP11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 SUSD2Q9UGT4 822 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 EIF2B4Q9UI10 523 aaKnown RBP11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 NCKAP1Q9Y2A7 1128 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 SLCO1B1Q9Y6L6 691 aa11.65□□□□□ -0.54
IGHV4-28-201ENST00000390612 SHROOM3Q8TF72 1996 aa11.65□□□□□ -0.55
IGHV4-28-201ENST00000390612 TDRD6O60522 2096 aaKnown RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 LRRK1Q38SD2 2015 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 A0A1W2PP55 124 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 MEI4A8MW99 385 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 UPK3BL1B0FP48 263 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 UPK3BL2E5RIL1 263 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ARHGAP33O14559 1287 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 CFIP05156 583 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 CTSLP07711 333 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 GNSP15586 552 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 PSMA2P25787 234 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 CASP14P31944 242 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 HTR7P34969 479 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ETFBP38117 255 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 PSMD8P48556 350 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 SERPINH1P50454 418 aaKnown RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 CCR5P51681 352 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ACCSLQ4AC99 568 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 KIAA0895LQ68EN5 471 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 IL31Q6EBC2 164 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 RETSATQ6NUM9 610 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 SCYL2Q6P3W7 929 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 LINGO4Q6UY18 593 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 DSG4Q86SJ6 1040 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 HDDC3Q8N4P3 179 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 RTL3Q8N8U3 475 aaKnown RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ATP11CQ8NB49 1132 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 TMIEQ8NEW7 156 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR2T34Q8NGX1 318 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR8D1Q8WZ84 308 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZNF653Q96CK0 615 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 TRIM11Q96F44 468 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 SPON2Q9BUD6 331 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 CEP44Q9C0F1 390 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 ATP13A1Q9HD20 1204 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 FSCN3Q9NQT6 498 aa11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 DNAAF2Q9NVR5 837 aaKnown RBP11.64□□□□□ -0.55
IGHV4-28-201ENST00000390612 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 RNF103O00237 685 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 CBX4O00257 560 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 BCAT2O15382 392 aaPredicted RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 SLC7A4O43246 635 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 LATO43561 262 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 KDELR3O43731 214 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 LRCH4O75427 683 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 IL1BP01584 269 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 CYP1A2P05177 515 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 SYPP08247 313 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 CD27P26842 260 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 EPHB2P29323 1055 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 MIPP30301 263 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 CHRNA3P32297 505 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 PCK1P35558 622 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ADPRHP54922 357 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 YBEYP58557 167 aaPredicted RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ACAP1Q15027 740 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 CA9Q16790 459 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 ERMARDQ5T6L9 678 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 FAM46CQ5VWP2 391 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 SPECC1LQ69YQ0 1117 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 RWDD4Q6NW29 188 aaKnown RBP11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 C22orf39Q6P5X5 142 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 NCEH1Q6PIU2 408 aa11.63□□□□□ -0.55
IGHV4-28-201ENST00000390612 PIP4P1Q86T03 277 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms