RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ICKQ9UPZ9 632 aa2.51□□□□□ -2.01
RNU6-541P-201ENST00000384709 DERAQ9Y315 318 aa2.51□□□□□ -2.01
RNU6-541P-201ENST00000384709 SQORQ9Y6N5 450 aa2.51□□□□□ -2.01
RNU6-541P-201ENST00000384709 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TCRBV7S3A2A0A539 114 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 C17orf102A2RUQ5 167 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TNFRSF13BO14836 293 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 RNMTO43148 476 aaKnown RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 RGS14O43566 566 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 SPRY3O43610 288 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 DHX16O60231 1041 aaKnown RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TMCC1O94876 653 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 DHRS4L1P0CG22 281 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 HOXD3P31249 432 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 CCKBRP32239 447 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 AARSP49588 968 aaKnown RBP eCLIP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 HTR6P50406 440 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 CYP2J2P51589 502 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 GAD2Q05329 585 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 PRKG1Q13976 671 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 CTXN3Q4LDR2 81 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 ARL13AQ5H913 290 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 ZNF484Q5JVG2 852 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 FBXO47Q5MNV8 452 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 CBWD5Q5RIA9 395 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 UBAP2Q5T6F2 1119 aaKnown RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 DENND1BQ6P3S1 775 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TMEM71Q6P5X7 295 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 SLC16A12Q6ZSM3 486 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 BBS12Q6ZW61 710 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 B4GALNT4Q76KP1 1039 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 RBM23Q86U06 439 aaKnown RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TRIM74Q86UV6 250 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TRIM73Q86UV7 250 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TMC8Q8IU68 726 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 CAMK1DQ8IU85 385 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 FTSJ3Q8IY81 847 aaKnown RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 MYCT1Q8N699 235 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 SPATA5Q8NB90 893 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 SETD9Q8NE22 299 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 C7orf57Q8NEG2 295 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 VPS37AQ8NEZ2 397 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 OR4N2Q8NGD1 307 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 NCSTNQ92542 709 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TBC1D20Q96BZ9 403 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 LTV1Q96GA3 475 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 ARPC5LQ9BPX5 153 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 HERPUD2Q9BSE4 406 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TRIM31Q9BZY9 425 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 MYLK2Q9H1R3 596 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 TAF1DQ9H5J8 278 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 PTPRHQ9HD43 1115 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 KRCC1Q9NPI7 259 aaPredicted RBP2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 UPB1Q9UBR1 384 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 SEL1LQ9UBV2 794 aa2.5□□□□□ -2.01
RNU6-541P-201ENST00000384709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 RPS10-NUDT3A0A1W2PQS6 291 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 KIF1CO43896 1103 aaKnown RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 HOXC6P09630 235 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 HOXB6P17509 224 aaKnown RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 KLRC2P26717 231 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 RFX5P48382 616 aaPredicted RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 TRAPPC10P48553 1259 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 CENPAP49450 140 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 RBM5P52756 815 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 ARHGAP8P85298 464 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 ADORA2A-AS1P86434 159 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 TRAF1Q13077 416 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 GPS2Q13227 327 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 BYSLQ13895 437 aaKnown RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 SYTL3Q4VX76 610 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 LRRC24Q50LG9 513 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 DCAF12L2Q5VW00 463 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 ANO1Q5XXA6 986 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 HMBOX1Q6NT76 420 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 RNF144BQ7Z419 303 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 SERPINA11Q86U17 422 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 WDR5BQ86VZ2 330 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 BRSK2Q8IWQ3 736 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 ADHFE1Q8IWW8 467 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 RBFAQ8N0V3 343 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 VPS52Q8N1B4 723 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 TMEM199Q8N511 208 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 IQCF1Q8N6M8 205 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 PRR26Q8N8Z3 221 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 SCAIQ8N9R8 606 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 CSGALNACT1Q8TDX6 532 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 TMEM170AQ8WVE7 144 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 MIB2Q96AX9 1013 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 SH3KBP1Q96B97 665 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 PHF21BQ96EK2 531 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 PAGR1Q9BTK6 254 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 DCLK3Q9C098 648 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 CLPBQ9H078 707 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 MRPL44Q9H9J2 332 aaKnown RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 SEPSECSQ9HD40 501 aaKnown RBP2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 CD93Q9NPY3 652 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 IL36RNQ9UBH0 155 aa2.49□□□□□ -2.01
RNU6-541P-201ENST00000384709 HDAC6Q9UBN7 1215 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms