RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ANKS1BQ7Z6G8 1248 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM200AQ86VY9 491 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM72BQ86X60 149 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CCDC28AQ8IWP9 274 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 LYG1Q8N1E2 194 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 CIARTQ8N365 385 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SRBD1Q8N5C6 995 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 KBTBD3Q8NAB2 608 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM156AQ8NDB6 213 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF248Q8NDW4 579 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM110DQ8TAY7 271 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 GRAPLQ8TC17 118 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF501Q96CX3 271 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 IQCDQ96DY2 449 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MTBPQ96DY7 904 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MCRS1Q96EZ8 462 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF414Q96IQ9 312 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAR2Q96K12 515 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MSLNLQ96KJ4 702 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF599Q96NL3 588 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 NUDT22Q9BRQ3 303 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 RBM4Q9BWF3 364 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 MAGEB5Q9BZ81 275 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 UBXN6Q9BZV1 441 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 LHPPQ9H008 270 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PCDHAC1Q9H158 963 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 EPS8L2Q9H6S3 715 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 FAM204AQ9H8W3 233 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ACTR5Q9H9F9 607 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 UBTD1Q9HAC8 227 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 LRRC4Q9HBW1 653 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF334Q9HCZ1 680 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 PTPRHQ9HD43 1115 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZFP57Q9NU63 452 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZDHHC7Q9NXF8 308 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ARL15Q9NXU5 204 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 RGS17Q9UGC6 210 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 NOB1Q9ULX3 412 aaKnown RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 UBE2J1Q9Y385 318 aaPredicted RBP0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF711Q9Y462 761 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SNX13Q9Y5W8 968 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 SNX9Q9Y5X1 595 aa0.6□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF318Q5VUA4 2279 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CACNA1FO60840 1977 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3DA0A087WVF3 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3IA0A087WXS9 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3EA0A087X179 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3KA0A087X1G2 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 hDV102S1A0JD36 115 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 C17orf102A2RUQ5 167 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3BA6NDS4 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3FA6NER0 549 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 C3orf70A6NLC5 250 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 A6NNZ2 444 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RHPN2P1A8MT19 583 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3LB9A6J9 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 GOLIM4O00461 696 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 AREL1O15033 823 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 NKX2-8O15522 239 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF500O60304 480 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 IGSF3O75054 1194 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CLDN7O95471 211 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CLDN14O95500 239 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PMS2P2O95744 297 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 NDST3O95803 873 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CER1O95813 267 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 HLA-DQA2P01906 255 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ITGA5P08648 1049 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3HP0C7X1 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 MYZAPP0CAP1 466 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FCGR2AP12318 317 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 MYL4P12829 197 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 UNGP13051 313 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SLC5A1P13866 664 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 IDEP14735 1019 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 HOXB9P17482 250 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 IGFBP2P18065 325 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 MYF6P23409 242 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SP100P23497 879 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 MARK3P27448 753 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PEX2P28328 305 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TIMP3P35625 211 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 LIFRP42702 1097 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FUT6P51993 359 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FOXL2P58012 376 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 DSCR10P59022 87 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TAS2R50P59544 299 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 KRTAP12-2P59991 146 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RPL15P61313 204 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 LMO4P61968 165 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RHAGQ02094 409 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RNASELQ05823 741 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ZBTB17Q13105 803 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PIN1Q13526 163 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PKP1Q13835 747 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 GRM4Q14833 912 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 POLD3Q15054 466 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CALCRLQ16602 461 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 LPAL2Q16609 132 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SYT16Q17RD7 645 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms