RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TRIM59Q8IWR1 403 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 ATP11CQ8NB49 1132 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 TMIEQ8NEW7 156 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 ALG14Q96F25 216 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 IFT43Q96FT9 208 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 PPP1R16AQ96I34 528 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 SLC2A13Q96QE2 648 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 MYOCQ99972 504 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 DUSP23Q9BVJ7 150 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 ABCG4Q9H172 646 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 NLGN3Q9NZ94 848 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 HS3ST2Q9Y278 367 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 CA5BQ9Y2D0 317 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 FLNBO75369 2602 aaKnown RBP16.4■□□□□ 0.22
VCX3A-201ENST00000381089 SETXQ7Z333 2677 aaKnown RBP16.39■□□□□ 0.21
VCX3A-201ENST00000381089 PCDH8O95206 1070 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 ZIC2O95409 532 aaPredicted RBP16.39■□□□□ 0.21
VCX3A-201ENST00000381089 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
VCX3A-201ENST00000381089 GP1BAP07359 652 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 RHOCP08134 193 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 USP8P40818 1118 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 RECQLP46063 649 aaPredicted RBP16.39■□□□□ 0.21
VCX3A-201ENST00000381089 CLCN6P51797 869 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 TAS2R38P59533 333 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 TAF5Q15542 800 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 PIP5KL1Q5T9C9 394 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 PPP1R13BQ96KQ4 1090 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 SYNCQ9H7C4 482 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 MAN1B1Q9UKM7 699 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 TBC1D30Q9Y2I9 924 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 HS3ST4Q9Y661 456 aa16.39■□□□□ 0.21
VCX3A-201ENST00000381089 A6NNZ2 444 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 OPA1O60313 960 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 PAGE1O75459 146 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 PIAS2O75928 621 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 SRCP12931 536 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 PLA2G2AP14555 144 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 MARSP56192 900 aaKnown RBP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 ERVPABLB-1P60509 514 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 HNRNPKP61978 463 aaKnown RBP eCLIP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 GABREP78334 506 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 RHDQ02161 417 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 CFHR1Q03591 330 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 ZNF284Q2VY69 593 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 OR6B2Q6IFH4 312 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 C11orf57Q6ZUT1 292 aaPredicted RBP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
VCX3A-201ENST00000381089 ZNF843Q8N446 348 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 KLK6Q92876 244 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 TMEM51Q9NW97 253 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 UCKL1Q9NWZ5 548 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 RRN3Q9NYV6 651 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 NCKIPSDQ9NZQ3 722 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 PCDHB1Q9Y5F3 818 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 OR51B4Q9Y5P0 310 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 DOCK9Q9BZ29 2069 aa16.38■□□□□ 0.21
VCX3A-201ENST00000381089 H3BM21 787 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 M0QYT0 321 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 USP12O75317 370 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 GRAP2O75791 330 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 DXOO77932 396 aaKnown RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 MPOP05164 745 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 NOS2P35228 1153 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 LSSP48449 732 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 PAK1Q13153 545 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 ACBD5Q5T8D3 534 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 CDCP2Q5VXM1 449 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 LRRC31Q6UY01 552 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 ERN2Q76MJ5 926 aaKnown RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 PTAR1Q7Z6K3 402 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 SETD3Q86TU7 594 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 FAM181AQ8N9Y4 354 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 OR13H1Q8NG92 308 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 OR52K2Q8NGK3 314 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 OR2A12Q8NGT7 310 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 KCNE4Q8WWG9 221 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 NAF1Q96HR8 494 aaKnown RBP16.37■□□□□ 0.21
VCX3A-201ENST00000381089 APOLD1Q96LR9 279 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 CPXM1Q96SM3 734 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 HDAC8Q9BY41 377 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 FZD3Q9NPG1 666 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 THSD1Q9NS62 852 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 DNAJC28Q9NX36 388 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 IL36AQ9UHA7 158 aa16.37■□□□□ 0.21
VCX3A-201ENST00000381089 SCAMP1O15126 338 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 CSO75390 466 aaKnown RBP16.36■□□□□ 0.21
VCX3A-201ENST00000381089 DAB1O75553 588 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 CTSLP07711 333 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 ARHGAP44Q17R89 818 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 C5orf22Q49AR2 442 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 BRMS1LQ5PSV4 323 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 KIAA1161Q6NSJ0 714 aa16.36■□□□□ 0.21
VCX3A-201ENST00000381089 Q6ZSR6 202 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms