RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 KLF15Q9UIH9 416 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 SLC25A13Q9UJS0 675 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 UTP20O75691 2785 aaKnown RBP17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NOTCH2Q04721 2471 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 POM121BA6NF01 834 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 M0QYV0 167 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 RNF103O00237 685 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 MUSKO15146 869 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NOBOXO60393 691 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 GJB6O95452 261 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 APOEP02649 317 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 CSF2P04141 144 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 ITGB2P05107 769 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NME1P15531 152 aaKnown RBP17.79■□□□□ 0.44
HMGN1-203ENST00000380748 VASPP50552 380 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-203ENST00000380748 MCCD1P59942 119 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NR0B2Q15466 257 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 CBWD6Q4V339 395 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 CBWD3Q5JTY5 395 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 CBWD5Q5RIA9 395 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 UBR7Q8N806 425 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 OR52K2Q8NGK3 314 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 TPCN2Q8NHX9 752 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 SYNDIG1Q9H7V2 258 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NCKIPSDQ9NZQ3 722 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 CSNK1G3Q9Y6M4 447 aa17.79■□□□□ 0.44
HMGN1-203ENST00000380748 NBASA2RRP1 2371 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 F5H5T6 163 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 KPNA3O00505 521 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-203ENST00000380748 AQP9O43315 295 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 FBXO21O94952 628 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 PCDH8O95206 1070 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 CALCAP01258 141 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 RPL13P26373 211 aaKnown RBP17.78■□□□□ 0.44
HMGN1-203ENST00000380748 SLC5A2P31639 672 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 ME1P48163 572 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 TLE1Q04724 770 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 FGL2Q14314 439 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 TMEM259Q4ZIN3 620 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 SYPL2Q5VXT5 272 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 PARGQ86W56 976 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 DCP2Q8IU60 420 aaKnown RBP17.78■□□□□ 0.44
HMGN1-203ENST00000380748 LMX1AQ8TE12 382 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 FAM149B1Q96BN6 582 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 PRMT1Q99873 361 aaKnown RBP17.78■□□□□ 0.44
HMGN1-203ENST00000380748 SALL4Q9UJQ4 1053 aa17.78■□□□□ 0.44
HMGN1-203ENST00000380748 TRPM6Q9BX84 2022 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 SPTY2D1-AS1A0A0U1RR47 76 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 TCAF2A6NFQ2 919 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 H3BM21 787 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 RAD51BO15315 384 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 YWHAEP62258 255 aaKnown RBP17.77■□□□□ 0.44
HMGN1-203ENST00000380748 CENPCQ03188 943 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-203ENST00000380748 TPRG1LQ5T0D9 272 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-203ENST00000380748 KYAT3Q6YP21 454 aaKnown RBP17.77■□□□□ 0.44
HMGN1-203ENST00000380748 JAMLQ86YT9 394 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 SH2D3CQ8N5H7 860 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 HSFY1Q96LI6 401 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.44
HMGN1-203ENST00000380748 PLD2O14939 933 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 GP1BBP13224 206 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 JUNDP17535 347 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 BRD2P25440 801 aaKnown RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 CHRNA3P32297 505 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 IRAK1P51617 712 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 PITX1P78337 314 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 LRMPQ12912 555 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 UBAP2LQ14157 1087 aaKnown RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 SPIDRQ14159 915 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 ZCWPW2Q504Y3 356 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 TMEM270Q6UE05 265 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 B3GNT8Q7Z7M8 397 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 SLC35F3Q8IY50 421 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 LIN37Q96GY3 246 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 IL12RB2Q99665 862 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 SEMA3CQ99985 751 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 CCDC3Q9BQI4 270 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 FEM1AQ9BSK4 669 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
HMGN1-203ENST00000380748 PCDHGA7Q9Y5G6 932 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 OR51B4Q9Y5P0 310 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 HS3ST3A1Q9Y663 406 aa17.76■□□□□ 0.43
HMGN1-203ENST00000380748 STX10O60499 249 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 MT-CO1P00395 513 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 PAEPP09466 180 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 PRR29P0C7W0 189 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 SRCP12931 536 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 OXCT1P55809 520 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 CNGA2Q16280 664 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 TBR1Q16650 682 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 DCAF17Q5H9S7 520 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-203ENST00000380748 RABGAP1LQ5R372 815 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms