RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 MARCKSL1P49006 195 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 DLG2Q15700 870 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 AFMIDQ63HM1 303 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 C22orf39Q6P5X5 142 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 ARHGAP12Q8IWW6 846 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 SYCE1Q8N0S2 351 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 NETO2Q8NC67 525 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 PCDH19Q8TAB3 1148 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 FAF2Q96CS3 445 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 SLC39A8Q9C0K1 460 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 SLC6A17Q9H1V8 727 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 CAPN6Q9Y6Q1 641 aa27.36■■□□□ 1.97
ATRAID-201ENST00000380171 TARSL2A2RTX5 802 aaKnown RBP27.35■■□□□ 1.97
ATRAID-201ENST00000380171 K7ERQ8 282 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 VAV1P15498 845 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 PAPOLAP51003 745 aaKnown RBP27.35■■□□□ 1.97
ATRAID-201ENST00000380171 LEKR1Q6ZMV7 388 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 Q6ZVU0 165 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 RNF10Q8N5U6 811 aaKnown RBP27.35■■□□□ 1.97
ATRAID-201ENST00000380171 FRS2Q8WU20 508 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 RNF25Q96BH1 459 aaPredicted RBP27.35■■□□□ 1.97
ATRAID-201ENST00000380171 MRGPRX1Q96LB2 322 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 KCNF1Q9H3M0 494 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 LZTFL1Q9NQ48 299 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 FAM86C1Q9NVL1 165 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 R4GN57 208 aa27.35■■□□□ 1.97
ATRAID-201ENST00000380171 CXorf51AA0A1B0GTR3 108 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 ZNF487B1APH4 448 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 SMAD6O43541 496 aaKnown RBP27.34■■□□□ 1.97
ATRAID-201ENST00000380171 COPAP53621 1224 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 SLC20A2Q08357 652 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 C9orf64Q5T6V5 341 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 NCBP2-AS2Q69YL0 99 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 PEX26Q7Z412 305 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 VSIG1Q86XK7 387 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 KATNAL2Q8IYT4 538 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 ZBTB44Q8NCP5 570 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.34■■□□□ 1.97
ATRAID-201ENST00000380171 KRT35Q92764 455 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 ZNF830Q96NB3 372 aaPredicted RBP27.34■■□□□ 1.97
ATRAID-201ENST00000380171 MKRN2Q9H000 416 aaKnown RBP27.34■■□□□ 1.97
ATRAID-201ENST00000380171 PRDM16Q9HAZ2 1276 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 SP110Q9HB58 689 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 PPP2R2CQ9Y2T4 447 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 ACTL7AQ9Y615 435 aa27.34■■□□□ 1.97
ATRAID-201ENST00000380171 C3orf70A6NLC5 250 aaPredicted RBP27.33■■□□□ 1.97
ATRAID-201ENST00000380171 MFSD11O43934 449 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 BNIP3LO60238 219 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 CTNNA1P35221 906 aaKnown RBP27.33■■□□□ 1.97
ATRAID-201ENST00000380171 CCDC173Q0VFZ6 552 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 ZNF776Q68DI1 518 aaPredicted RBP27.33■■□□□ 1.97
ATRAID-201ENST00000380171 TMPRSS6Q8IU80 811 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 PRCCQ92733 491 aaPredicted RBP27.33■■□□□ 1.97
ATRAID-201ENST00000380171 PTPRN2Q92932 1015 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 CCDC114Q96M63 670 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 CEP44Q9C0F1 390 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 AMFRQ9UKV5 643 aa27.33■■□□□ 1.97
ATRAID-201ENST00000380171 FCF1Q9Y324 198 aaKnown RBP27.33■■□□□ 1.97
ATRAID-201ENST00000380171 PLXND1Q9Y4D7 1925 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 CCDC66A2RUB6 948 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 RNASEH1O60930 286 aaKnown RBP27.32■■□□□ 1.96
ATRAID-201ENST00000380171 ELAVL3Q14576 367 aaKnown RBP27.32■■□□□ 1.96
ATRAID-201ENST00000380171 MFSD7Q6UXD7 560 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 NT5DC3Q86UY8 548 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 RFX6Q8HWS3 928 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 CCDC50Q8IVM0 306 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 TP53INP2Q8IXH6 220 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 STK40Q8N2I9 435 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 PQLC3Q8N755 202 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 SIPA1Q96FS4 1042 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 RBM41Q96IZ5 413 aaKnown RBP27.32■■□□□ 1.96
ATRAID-201ENST00000380171 RNF157Q96PX1 679 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 MAK16Q9BXY0 300 aaKnown RBP27.32■■□□□ 1.96
ATRAID-201ENST00000380171 TNKS2Q9H2K2 1166 aa27.32■■□□□ 1.96
ATRAID-201ENST00000380171 UBA2Q9UBT2 640 aaPredicted RBP27.32■■□□□ 1.96
ATRAID-201ENST00000380171 WDFY4Q6ZS81 3184 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 PRAMEF11O60813 436 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 FTCDO95954 541 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 CTNNA2P26232 953 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 RECQLP46063 649 aaPredicted RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 PAFAH1B3Q15102 231 aaKnown RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 USP39Q53GS9 565 aaKnown RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 ZNF662Q6ZS27 426 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 METTL3Q86U44 580 aaKnown RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 ATPAF2Q8N5M1 289 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 PCDH20Q8N6Y1 951 aaKnown RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 OR8D1Q8WZ84 308 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 RSPH9Q9H1X1 276 aaPredicted RBP27.31■■□□□ 1.96
ATRAID-201ENST00000380171 PDFQ9HBH1 243 aa27.31■■□□□ 1.96
ATRAID-201ENST00000380171 SHROOM3Q8TF72 1996 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 J3KR12 359 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 APOL1O14791 398 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 LILRB5O75023 590 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 RPP40O75818 363 aaKnown RBP27.3■■□□□ 1.96
ATRAID-201ENST00000380171 TMCC1O94876 653 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 CD160O95971 181 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 ACADMP11310 421 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 SRSF5Q13243 272 aaKnown RBP27.3■■□□□ 1.96
ATRAID-201ENST00000380171 SPOCD1Q6ZMY3 1216 aa27.3■■□□□ 1.96
ATRAID-201ENST00000380171 ARHGAP36Q6ZRI8 547 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms