RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ACADMP11310 421 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 TMPRSS6Q8IU80 811 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 RNF10Q8N5U6 811 aaKnown RBP20.44■□□□□ 0.86
RER1-204ENST00000378518 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.44■□□□□ 0.86
RER1-204ENST00000378518 CASKIN2Q8WXE0 1202 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 RAPGEF5Q92565 580 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 SIPA1Q96FS4 1042 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 SPACA7Q96KW9 195 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 MRGPRX1Q96LB2 322 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 MAK16Q9BXY0 300 aaKnown RBP20.44■□□□□ 0.86
RER1-204ENST00000378518 CEP44Q9C0F1 390 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 SLC39A8Q9C0K1 460 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 TRIM10Q9UDY6 481 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 FARP1Q9Y4F1 1045 aaPredicted RBP20.44■□□□□ 0.86
RER1-204ENST00000378518 R4GN57 208 aa20.44■□□□□ 0.86
RER1-204ENST00000378518 SHROOM3Q8TF72 1996 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 ZNF487B1APH4 448 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 LILRB5O75023 590 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 ZNF217O75362 1048 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 MT-CO1P00395 513 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 IL4RP24394 825 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 RECQLP46063 649 aaPredicted RBP20.43■□□□□ 0.86
RER1-204ENST00000378518 COPAP53621 1224 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 ELAVL3Q14576 367 aaKnown RBP20.43■□□□□ 0.86
RER1-204ENST00000378518 C9orf64Q5T6V5 341 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 AFMIDQ63HM1 303 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 ZNF776Q68DI1 518 aaPredicted RBP20.43■□□□□ 0.86
RER1-204ENST00000378518 C22orf39Q6P5X5 142 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 DSG4Q86SJ6 1040 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 NPWQ8N729 165 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 FRS2Q8WU20 508 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 GAB3Q8WWW8 586 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 PTPRN2Q92932 1015 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 FAF2Q96CS3 445 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 MKRN2Q9H000 416 aaKnown RBP20.43■□□□□ 0.86
RER1-204ENST00000378518 KLC2Q9H0B6 622 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 MTG2Q9H4K7 406 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 SP110Q9HB58 689 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 FAM86C1Q9NVL1 165 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 GUCA1BQ9UMX6 200 aa20.43■□□□□ 0.86
RER1-204ENST00000378518 A0A0U1RQJ8 604 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 CCDC66A2RUB6 948 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 GRID2IPA4D2P6 1211 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 BNIP3LO60238 219 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 RPP40O75818 363 aaKnown RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 DNTTP04053 509 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 PAPOLAP51003 745 aaKnown RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 Q6ZVU0 165 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 C11orf74Q86VG3 221 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 ARHGAP12Q8IWW6 846 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 KATNAL2Q8IYT4 538 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 PCDH20Q8N6Y1 951 aaKnown RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 PCDH19Q8TAB3 1148 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 OR8D1Q8WZ84 308 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 RNF25Q96BH1 459 aaPredicted RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 SLC6A17Q9H1V8 727 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 RSPH9Q9H1X1 276 aaPredicted RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 SEMA4AQ9H3S1 761 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 ETNK2Q9NVF9 386 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 UBA2Q9UBT2 640 aaPredicted RBP20.42■□□□□ 0.86
RER1-204ENST00000378518 AMFRQ9UKV5 643 aa20.42■□□□□ 0.86
RER1-204ENST00000378518 K7ERQ8 282 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 ALOX15BO15296 676 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 PALMO75781 387 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 CTNNA1P35221 906 aaKnown RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 NBL1P41271 181 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 ZBTB16Q05516 673 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 SFSWAPQ12872 951 aaKnown RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 PAFAH1B3Q15102 231 aaKnown RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 TTC31Q49AM3 519 aaPredicted RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 NCBP2-AS2Q69YL0 99 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 ZNF662Q6ZS27 426 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 CEP68Q76N32 757 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 PEX26Q7Z412 305 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 CACUL1Q86Y37 369 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 STK40Q8N2I9 435 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 ATPAF2Q8N5M1 289 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 LRRC57Q8N9N7 239 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 RBM41Q96IZ5 413 aaKnown RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 RNF157Q96PX1 679 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 SCML1Q9UN30 329 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 FCF1Q9Y324 198 aaKnown RBP20.41■□□□□ 0.86
RER1-204ENST00000378518 MFHAS1Q9Y4C4 1052 aa20.41■□□□□ 0.86
RER1-204ENST00000378518 SMAD6O43541 496 aaKnown RBP20.4■□□□□ 0.86
RER1-204ENST00000378518 PRAMEF11O60813 436 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 ZRANB2O95218 330 aaKnown RBP eCLIP20.4■□□□□ 0.863e-7■■■■□ 21
RER1-204ENST00000378518 VAV1P15498 845 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 ZFXP17010 805 aaPredicted RBP20.4■□□□□ 0.86
RER1-204ENST00000378518 CTNNA2P26232 953 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 NHLH1Q02575 133 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 IL10RBQ08334 325 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 CCDC173Q0VFZ6 552 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 LEKR1Q6ZMV7 388 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 RFX6Q8HWS3 928 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 CCDC50Q8IVM0 306 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 RCOR2Q8IZ40 523 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 EXD1Q8NHP7 514 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 CEP192Q8TEP8 1941 aa20.4■□□□□ 0.86
RER1-204ENST00000378518 ISG20Q96AZ6 181 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms