RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CNOT8Q9UFF9 292 aaKnown RBP17.41■□□□□ 0.38
RER1-202ENST00000378512 SCINQ9Y6U3 715 aa17.41■□□□□ 0.38
RER1-202ENST00000378512 SPEGQ15772 3267 aa17.41■□□□□ 0.38
RER1-202ENST00000378512 A0A087X0T9 212 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 ALOX15BO15296 676 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 SNAP91O60641 907 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 RNASEH1O60930 286 aaKnown RBP17.4■□□□□ 0.38
RER1-202ENST00000378512 FAM228BP0C875 321 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 CD59P13987 128 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 NUMBP49757 651 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 CLCN6P51797 869 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 ATXN3P54252 364 aaPredicted RBP17.4■□□□□ 0.38
RER1-202ENST00000378512 GNA12Q03113 381 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 TRIM14Q14142 442 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 DLG2Q15700 870 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 TTC31Q49AM3 519 aaPredicted RBP17.4■□□□□ 0.38
RER1-202ENST00000378512 CYP4V2Q6ZWL3 525 aaPredicted RBP17.4■□□□□ 0.38
RER1-202ENST00000378512 RABEPKQ7Z6M1 372 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 VSTM4Q8IW00 320 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 PYROXD2Q8N2H3 581 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 STK40Q8N2I9 435 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 OR7D4Q8NG98 312 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 TBC1D31Q96DN5 1066 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 TRIM7Q9C029 511 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 SGK2Q9HBY8 427 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 FZD4Q9ULV1 537 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 CFAP47Q6ZTR5 3102 aa17.4■□□□□ 0.38
RER1-202ENST00000378512 PLXNA2O75051 1894 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 WASH4PA8MWX3 477 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 MCF2LO15068 1137 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 ZNF821O75541 412 aaPredicted RBP17.39■□□□□ 0.38
RER1-202ENST00000378512 CD160O95971 181 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 ADH1BP00325 375 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 HTR7P34969 479 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 ARF5P84085 180 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 SLC20A2Q08357 652 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 ACAP1Q15027 740 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 EFHC2Q5JST6 749 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 VPS36Q86VN1 386 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 MMAAQ8IVH4 418 aaKnown RBP17.39■□□□□ 0.38
RER1-202ENST00000378512 ZCCHC9Q8N567 271 aaKnown RBP17.39■□□□□ 0.38
RER1-202ENST00000378512 ARHGEF2Q92974 986 aaKnown RBP17.39■□□□□ 0.38
RER1-202ENST00000378512 ZNF653Q96CK0 615 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 BTBD1Q9H0C5 482 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 MIR1-1HGQ9H1L0 117 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 MRPL47Q9HD33 250 aaKnown RBP17.39■□□□□ 0.38
RER1-202ENST00000378512 SERGEFQ9UGK8 458 aa17.39■□□□□ 0.38
RER1-202ENST00000378512 MEI4A8MW99 385 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 EIF3CLB5ME19 914 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 MID1O15344 667 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SMAD6O43541 496 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 C5AR1P21730 350 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 GLDCP23378 1020 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 PSMA2P25787 234 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SLC8A1P32418 973 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 DRD3P35462 400 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 SFSWAPQ12872 951 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 GRIK2Q13002 908 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 ASTE1Q2TB18 679 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 WDR45BQ5MNZ6 344 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SYCP2LQ5T4T6 812 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SCYL2Q6P3W7 929 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 AADATQ8N5Z0 425 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 RTL3Q8N8U3 475 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 PEBP4Q96S96 227 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 EIF3CQ99613 913 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 SCNM1Q9BWG6 230 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 TMEM121BQ9BXQ6 578 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 MAGEH1Q9H213 219 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 C6orf106Q9H6K1 298 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 NOL6Q9H6R4 1146 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 FBXL12Q9NXK8 326 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SARDHQ9UL12 918 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 PPM1HQ9ULR3 514 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 TP53BP1Q12888 1972 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 K7ERQ8 282 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 HYAL3O43820 417 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 OPHN1O60890 802 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 LRCH4O75427 683 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 GJB3O75712 270 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 SEMA4FO95754 770 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 CYP1A2P05177 515 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 DESP17661 470 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 ETFBP38117 255 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 BNC1Q01954 994 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 RWDD4Q6NW29 188 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 ALKBH5Q6P6C2 394 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 Q6ZVU0 165 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 PSTKQ8IV42 348 aaKnown RBP17.38■□□□□ 0.37
RER1-202ENST00000378512 HDDC3Q8N4P3 179 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 OR8K1Q8NGG5 319 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 OR2A12Q8NGT7 310 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 OR8D1Q8WZ84 308 aa17.38■□□□□ 0.37
RER1-202ENST00000378512 NCAPGQ9BPX3 1015 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms