RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 LNPEPQ9UIQ6 1025 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 NR2E1Q9Y466 385 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CABYRO75952 493 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 COX4I1P13073 169 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 SERPINB1P30740 379 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 FMO4P31512 558 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 ICAM3P32942 547 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 GRIA4P48058 902 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 AIF1P55008 147 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 MRPS6P82932 125 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 POTEHQ6S545 545 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 PCDH20Q8N6Y1 951 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 SLC4A11Q8NBS3 891 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 COPS7BQ9H9Q2 264 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 RCOR3Q9P2K3 495 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 TNPO3Q9Y5L0 923 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 STK25O00506 426 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MLNP12872 115 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 LRPAP1P30533 357 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ATP5C1P36542 298 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 CDC16Q13042 620 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 NKAPQ8N5F7 415 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 RDH11Q8TC12 318 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 CPT1BQ92523 772 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 UROC1Q96N76 676 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 PANX3Q96QZ0 392 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 C9orf16Q9BUW7 83 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 MPP6Q9NZW5 540 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FAM50BQ9Y247 325 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MRPL42Q9Y6G3 142 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 PMM2O15305 246 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ADRA1BP35368 520 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 CD86P42081 329 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PIK3CGP48736 1102 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 NEK3P51956 506 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 RAB10P61026 200 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PFKFB4Q16877 469 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 TRIM16LQ309B1 348 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ARMC12Q5T9G4 340 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 LPCAT2Q7L5N7 544 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PLD5Q8N7P1 536 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MCOLN3Q8TDD5 553 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 TLCD1Q96CP7 247 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MRPL57Q9BQC6 102 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 MRPL45Q9BRJ2 306 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 FAM192AQ9GZU8 254 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FBXO6Q9NRD1 293 aaPredicted RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 SNX15Q9NRS6 342 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MYRFQ9Y2G1 1151 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 KRT36O76013 467 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 COL1A2P08123 1366 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 CHRNB2P17787 502 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 TFEBP19484 476 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 CYP2A7P20853 494 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 GPC1P35052 558 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 SDE2Q6IQ49 451 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 SLC44A2Q8IWA5 706 aaPredicted RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 KIAA2013Q8IYS2 634 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 DHRSXQ8N5I4 330 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 C1orf127Q8N9H9 656 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PPTC7Q8NI37 304 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 RNF145Q96MT1 663 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 ZYG11BQ9C0D3 744 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PAIP2BQ9ULR5 123 aaKnown RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
RPGR-203ENST00000378505 SEC22BO75396 215 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 BPGMP07738 259 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 TPSB2P20231 275 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 MSH3P20585 1137 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 RRM2P31350 389 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PTGIRP43119 386 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PSEN1P49768 467 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 HK2P52789 917 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 BCL2L1Q07817 233 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 TPSAB1Q15661 275 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 PRAMEF19Q5SWL8 479 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 STK32CQ86UX6 486 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 LRRN4Q8WUT4 740 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 KCTD4Q8WVF5 259 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FIG4Q92562 907 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 CSPG4P5Q96PW8 444 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 UGT2B28Q9BY64 529 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 B3GNT5Q9BYG0 378 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 XPNPEP1Q9NQW7 623 aa11.44□□□□□ -0.58
RPGR-203ENST00000378505 FGFR1P11362 822 aa11.43□□□□□ -0.58
RPGR-203ENST00000378505 DUSP28Q4G0W2 176 aa11.43□□□□□ -0.58
RPGR-203ENST00000378505 LACTB2Q53H82 288 aaPredicted RBP11.43□□□□□ -0.58
RPGR-203ENST00000378505 TREML2Q5T2D2 321 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms