RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SLC26A11Q86WA9 606 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 TTC39CQ8N584 583 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 C2orf73Q8N5S3 287 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ZMIZ2Q8NF64 920 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 USP13Q92995 863 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ZFYVE19Q96K21 471 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SPATA13Q96N96 652 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GCNAQ96QF7 691 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SLC39A8Q9C0K1 460 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CATSPERBQ9H7T0 1116 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GIT1Q9Y2X7 761 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ANGPTL3Q9Y5C1 460 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SPTAN1Q13813 2472 aaKnown RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 PIRO00625 290 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SF3B1O75533 1304 aaKnown RBP eCLIP8.25□□□□□ -1.094e-6■■□□□ 13.4
CKAP2-203ENST00000378037 ASMTLO95671 621 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 HAPLN1P10915 354 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 FOXN2P32314 431 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 HADHAP40939 763 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SERPINB4P48594 390 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 RHOAP61586 193 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 IRF9Q00978 393 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CUL3Q13618 768 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 PARP14Q460N5 1801 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 LRIG3Q6UXM1 1119 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SZRD1Q7Z422 152 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 FBXO22Q8NEZ5 403 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 HDAC10Q969S8 669 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 WDR55Q9H6Y2 383 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 MYO10Q9HD67 2058 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 TLR8Q9NR97 1041 aaKnown RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 DSEQ9UL01 958 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GRIN2DO15399 1336 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 TBL1XO60907 577 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 IGFBP4P22692 258 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 FMO4P31512 558 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 RECQLP46063 649 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF132P52740 706 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 NTHL1P78549 312 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 UPP1Q16831 310 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 STXBP5Q5T5C0 1151 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ANGPTL8Q6UXH0 198 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CDHR3Q6ZTQ4 885 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SEC14L1Q92503 715 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 VPS39Q96JC1 886 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 HNRNPABQ99729 332 aaKnown RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ADAM7Q9H2U9 754 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CNTN3Q9P232 1028 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 PNMA8BQ9ULN7 279 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 TLL2Q9Y6L7 1015 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CLUHO75153 1309 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 C2orf78A6NCI8 922 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 B2RBV5 119 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SH3BP5O60239 455 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 CXCL14O95715 111 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 CORO1AP31146 461 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ATP5C1P36542 298 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 WNT3AP56704 352 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 BST1Q10588 318 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 UBAP2LQ14157 1087 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 MILR1Q7Z6M3 343 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 PPHLN1Q8NEY8 458 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SORCS1Q8WY21 1168 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF75CPQ92670 426 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 PPWD1Q96BP3 646 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 CLPTM1LQ96KA5 538 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 TBATAQ96M53 351 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 KATNBL1Q9H079 304 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF236Q9UL36 1845 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 E9PAM4 449 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 NDUFS3O75489 264 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 C1RP00736 705 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ITGAVP06756 1048 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 OXCT1P55809 520 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 C6orf163Q5TEZ5 329 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SPRED2Q7Z698 418 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 TMEM110Q86TL2 294 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 MIER2Q8N344 545 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 FLCNQ8NFG4 579 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SLC35B2Q8TB61 432 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 MTFMTQ96DP5 389 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ALG9Q9H6U8 611 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 ADA2Q9NZK5 511 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SUPT3HB4E1H0 165 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 AURKAO14965 403 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 STX7O15400 261 aaKnown RBP8.24□□□□□ -1.09
CKAP2-203ENST00000378037 DCXO43602 365 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 TLL1O43897 1013 aa8.24□□□□□ -1.09
CKAP2-203ENST00000378037 SUPT3HO75486 399 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms