RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SPOUT1Q5T280 376 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 FAM45BPQ6NSW5 357 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 FAM45AQ8TCE6 357 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SLC7A8Q9UHI5 535 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 DHRS12A0PJE2 317 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TYROBPO43914 113 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 B4GALT4O60513 344 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TPH1P17752 444 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CDH3P22223 829 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 AXLP30530 894 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 KRT20P35900 424 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 NAGLUP54802 743 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PURAQ00577 322 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 IL5RAQ01344 420 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 MTA1Q13330 715 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PTRHD1Q6GMV3 140 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ZDHHC13Q8IUH4 622 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 FBXO39Q8N4B4 442 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 WNT8BQ93098 351 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TRIM63Q969Q1 353 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PHF21BQ96EK2 531 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TRMOQ9BU70 441 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 DEFB129Q9H1M3 183 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 MAN1C1Q9NR34 630 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 RGS18Q9NS28 235 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 A0A087WZ62 844 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF12P17014 697 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TM4SF1P30408 202 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SOX11P35716 441 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TNFSF9P41273 254 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 MAP3K7CLP57077 242 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ITGADQ13349 1161 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ARMCX4Q5H9R4 360 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PLD5Q8N7P1 536 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 HM13Q8TCT9 377 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 BSNDQ8WZ55 320 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SLC10A4Q96EP9 437 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 RNF145Q96MT1 663 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SEPHS2Q99611 448 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 FDXACB1Q9BRP7 624 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SPON2Q9BUD6 331 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 POLR1BQ9H9Y6 1135 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PIH1D1Q9NWS0 290 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 LEF1Q9UJU2 399 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 DSEQ9UL01 958 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 FGF10O15520 208 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PIAS1O75925 651 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 C6orf52Q5T4I8 152 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 VPS37AQ8NEZ2 397 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 OR2T34Q8NGX1 318 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 OR2T3Q8NH03 318 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 MARK4Q96L34 752 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PANX3Q96QZ0 392 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TSPAN18Q96SJ8 248 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ZC4H2Q9NQZ6 224 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 HACL1Q9UJ83 578 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CAB39Q9Y376 341 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CHRM3P20309 590 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 EPHA3P29320 983 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PPM1FP49593 454 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 GPX6P59796 221 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 CRADDP78560 199 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 TRAP1Q12931 704 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 POLD3Q15054 466 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ANKS6Q68DC2 871 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ANKRD52Q8NB46 1076 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PNPT1Q8TCS8 783 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 SEPT8Q92599 483 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ADAM7Q9H2U9 754 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 C12orf65Q9H3J6 166 aaKnown RBP8.89□□□□□ -0.99
PCDH9-202ENST00000377865 HPS4Q9NQG7 708 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 WWOXQ9NZC7 414 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PLA2G4CQ9UP65 541 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 PPP2R3BQ9Y5P8 575 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 GMEB1Q9Y692 573 aa8.89□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF197O14709 1029 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 CSPG5O95196 566 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 MED26O95402 600 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 IL1BP01584 269 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 NFICP08651 508 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 GALK1P51570 392 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 USP46P62068 366 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 USP4Q13107 963 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ZRANB3Q5FWF4 1079 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 STRADAQ7RTN6 431 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 AMIGO2Q86SJ2 522 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ADGRG6Q86SQ4 1221 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ERI1Q8IV48 349 aaKnown RBP8.88□□□□□ -0.99
PCDH9-202ENST00000377865 HERC6Q8IVU3 1022 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 ADHFE1Q8IWW8 467 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 REPS2Q8NFH8 660 aa8.88□□□□□ -0.99
PCDH9-202ENST00000377865 KCTD4Q8WVF5 259 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms