RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FUBP3Q96I24 572 aaKnown RBP eCLIP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SUSD3Q96L08 255 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TRIM15Q9C019 465 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 THAP1Q9NVV9 213 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 MYH7BA7E2Y1 1941 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 COL5A3P25940 1745 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TRAV19A0A0A6YYK7 116 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TBL1XO60907 577 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 ESRRBO95718 433 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 FAM163BP0C2L3 166 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 ALADP13716 330 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 GCKP35557 465 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SCNN1AP37088 669 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 LPIN1Q14693 890 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 WWOXQ9NZC7 414 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 E9PAM4 449 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 CASQ2O14958 399 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 IGSF6O95976 241 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TPSB2P20231 275 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SLC1A6P48664 564 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 NRLP54845 237 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 RASA2Q15283 850 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TPSAB1Q15661 275 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 CNGA3Q16281 694 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 ZDHHC18Q9NUE0 388 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 C5orf60A6NFR6 353 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SOCS7O14512 581 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 MYO1DO94832 1006 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SOX4Q06945 474 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-202ENST00000377797 LRRC8EQ6NSJ5 796 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 HFE2Q6ZVN8 426 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 OTOP3Q7RTS5 596 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 RXFP1Q9HBX9 757 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 TAS2R13Q9NYV9 303 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 LZTS3O60299 673 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-202ENST00000377797 COPAP53621 1224 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 MFSD5Q6N075 450 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 TUBGCP3Q96CW5 907 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 KDM4CQ9H3R0 1056 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 PIGVQ9NUD9 493 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 RNF186Q9NXI6 227 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 A8MX80 341 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 LRPAP1P30533 357 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 CRYMQ14894 314 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 ZNF284Q2VY69 593 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 ZNF567Q8N184 647 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 MRGBPQ9NV56 204 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 GNEQ9Y223 722 aaKnown RBP14.73□□□□□ -0.05
TCOF1-202ENST00000377797 NR2E3Q9Y5X4 410 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 E9PBE3 544 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SNX3O60493 162 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 KLHL41O60662 606 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 EFCAB14O75071 495 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 EDN1P05305 212 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 ITGA2BP08514 1039 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 TPBGLP0DKB5 382 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 PLK1P53350 603 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SLC25A11Q02978 314 aaKnown RBP14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SETD3Q86TU7 594 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-202ENST00000377797 CD101Q93033 1021 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 SEZ6LQ9BYH1 1024 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 VCX3AQ9NNX9 186 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 CASS4Q9NQ75 786 aa14.73□□□□□ -0.05
TCOF1-202ENST00000377797 A0A1W2PQ45 241 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 A0A1W2PQY0 241 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 PRR23AA6NEV1 266 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TLL1O43897 1013 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TCEAL1Q15170 157 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 LRRC8BQ6P9F7 803 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 LAYNQ6UX15 382 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 IFNEQ86WN2 208 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 MYO1HQ8N1T3 1032 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FLRT1Q9NZU1 646 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 GCATO75600 419 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 MLNP12872 115 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 RHOQP17081 205 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 ITGB6P18564 788 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 CREMQ03060 361 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 RFWD3Q6PCD5 774 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 POTEHQ6S545 545 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 AGMOQ6ZNB7 445 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 PGBD3Q8N328 593 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TTC30BQ8N4P2 665 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 WDTC1Q8N5D0 677 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 SNX31Q8N9S9 440 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 TDRD5Q8NAT2 981 aaKnown RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FBXO6Q9NRD1 293 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 RIC8BQ9NVN3 520 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 LAMB2P55268 1798 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 KCNU1A8MYU2 1149 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 MT-CO1P00395 513 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 CDK18Q07002 472 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 CTBP1Q13363 440 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 FAM182AQ5T1J6 154 aa14.72□□□□□ -0.05
TCOF1-202ENST00000377797 ACBD5Q5T8D3 534 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-202ENST00000377797 PCYOX1LQ8NBM8 494 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms