RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TFECO14948 347 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 RAB43Q86YS6 212 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 TTYH1Q9H313 450 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 METP08581 1390 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SIN3BO75182 1162 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 POU5F1Q01860 360 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ITIH5Q86UX2 942 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MRPS31Q92665 395 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 RPL10AP62906 217 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 BNIP2Q12982 314 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ALX1Q15699 326 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 XRRA1Q6P2D8 792 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DNAJA4Q8WW22 397 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CDADC1Q9BWV3 514 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 GPN3Q9UHW5 284 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SNAP23O00161 211 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CCNKO75909 580 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PSMG1O95456 288 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CYP2A6P11509 494 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 TXNDC11Q6PKC3 985 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 TMPRSS11AQ6ZMR5 421 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 GJD3Q8N144 294 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DENND6BQ8NEG7 585 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MAP10Q9P2G4 905 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CKMP06732 381 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 GZMAP12544 262 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CDK16Q00536 496 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MBTD1Q05BQ5 628 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MEA1Q16626 185 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CRELD2Q6UXH1 353 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PYDC1Q8WXC3 89 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM169Q96HH4 297 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ACAT1P24752 427 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PPP2R2BQ00005 443 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 WDR59Q6PJI9 974 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 NT5MQ9NPB1 228 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SLC12A4Q9UP95 1085 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DCXO43602 365 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DNAJB2P25686 324 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 GIPC3Q8TF64 312 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 RNPEPL1Q9HAU8 725 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 TBX20Q9UMR3 447 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SNAPC5O75971 98 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 ITGB3P05106 788 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 SPDYCQ5MJ68 293 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PTAR1Q7Z6K3 402 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 PIH1D3Q9NQM4 214 aaKnown RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 CITO14578 2027 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 KAT5Q92993 513 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 CD101Q93033 1021 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM121Q9BTD3 319 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 FAIM2Q9BWQ8 316 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 VPS4AQ9UN37 437 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 ABCA8O94911 1581 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 FAM240BA0A1B0GVZ2 78 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 POLD2P49005 469 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 POU6F1Q14863 301 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 MED22Q15528 200 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 DNAJC14Q6Y2X3 702 aaPredicted RBP11.78□□□□□ -0.52
VPS13A-205ENST00000376636 QSOX2Q6ZRP7 698 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 FCHO1O14526 889 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 NMT2O60551 498 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 FSBPO95073 299 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 PCDH8O95206 1070 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 TCEAL6Q6IPX3 200 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 TC2NQ8N9U0 490 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 GPER1Q99527 375 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 COG5Q9UP83 839 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 SERPINB7O75635 380 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 VIL1P09327 827 aaKnown RBP11.78□□□□□ -0.52
VPS13A-205ENST00000376636 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 TYMPP19971 482 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 GRIA3P42263 894 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 SLC4A11Q8NBS3 891 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 C11orf24Q96F05 449 aaPredicted RBP11.78□□□□□ -0.52
VPS13A-205ENST00000376636 ATXN10Q9UBB4 475 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 KCNIP3Q9Y2W7 256 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 CASKO14936 926 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 OGTO15294 1046 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 RHOCP08134 193 aa11.78□□□□□ -0.52
VPS13A-205ENST00000376636 SQLEQ14534 574 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms