RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	MZF1	P28698	734 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SOX9	P48436	509 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF132	P52740	706 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	TCEAL5	Q5H9L2	206 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF470	Q6ECI4	717 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	CHST9	Q7L1S5	443 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ADCK2	Q7Z695	626 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	IGSF8	Q969P0	613 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	CYTH2	Q99418	400 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	TTC1	Q99614	292 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	NEUROG2	Q9H2A3	272 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	NUP205	Q92621	2012 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568		A0A0G2JND7	137 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ATP5B	P06576	529 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	PGGT1B	P53609	377 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	WNT3A	P56704	352 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF252P-AS1	Q0IIN9	211 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ALKAL1	Q6UXT8	129 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	FRA10AC1	Q70Z53	315 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	VSIG1	Q86XK7	387 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ANKLE1	Q8NAG6	615 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ITFG1	Q8TB96	612 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	CABS1	Q96KC9	395 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF576	Q9H609	170 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SLCO3A1	Q9UIG8	710 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	AGO1	Q9UL18	857 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SDR42E2	A6NKP2	422 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	GNA12	Q03113	381 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	BOP1	Q14137	746 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	STARD3	Q14849	445 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	4e-6	■■■■□ 22.5
DDR1-225	ENST00000376568		Q6ZVU0	165 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	GLT6D1	Q7Z4J2	308 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SCD5	Q86SK9	330 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SH3KBP1	Q96B97	665 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	ELAC1	Q9H777	363 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	MTRR	Q9UBK8	725 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	SQOR	Q9Y6N5	450 aa		13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	C1orf232	A0A0U1RR37	186 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	TCRBV7S3A2	A0A539	114 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF840P	A6NDX5	716 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	FSCN2	O14926	492 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	SNX2	O60749	519 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	FAM155B	O75949	473 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	OAZ2	O95190	189 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	GFAP	P14136	432 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	RFC2	P35250	354 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	CLDN10	P78369	228 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	RPS6KA2	Q15349	733 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	STRA8	Q7Z7C7	330 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	TMEM25	Q86YD3	366 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	ARMC5	Q96C12	935 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	TRABD	Q9H4I3	376 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	CHRAC1	Q9NRG0	131 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	SCN1A	P35498	2009 aa		13.77	□□□□□ -0.2
DDR1-225	ENST00000376568	IQANK1	A0A1B0GTG1	560 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	SLC31A1	O15431	190 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	METTL18	O95568	372 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	CTSA	P10619	480 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	ATF6	P18850	670 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	PEX5	P50542	639 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	IRAK1	P51617	712 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	GEM	P55040	296 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	RAB30	Q15771	203 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	TRNP1	Q6NT89	227 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	CMTR2	Q8IYT2	770 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	RNF31	Q96EP0	1072 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	OMD	Q99983	421 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	ELAC2	Q9BQ52	826 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	POLR1E	Q9GZS1	481 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	TASP1	Q9H6P5	420 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	PCDH9	Q9HC56	1237 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	OSER1	Q9NX31	292 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	CACNA2D2	Q9NY47	1150 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	SEPT3	Q9UH03	358 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	FZD10	Q9ULW2	581 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	WASH3P	C4AMC7	463 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	KRT4	P19013	534 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	CCT5	P48643	541 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	IFI35	P80217	286 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	TAF1B	Q53T94	588 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	TPGS2	Q68CL5	300 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	MRPL43	Q8N983	215 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	HJURP	Q8NCD3	748 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	MFSD3	Q96ES6	412 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	RTP3	Q9BQQ7	232 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	CCL26	Q9Y258	94 aa		13.77	□□□□□ -0.21
DDR1-225	ENST00000376568	ERI2	A8K979	691 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	DNALI1	O14645	258 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	RHOBTB1	O94844	696 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	COL6A1	P12109	1028 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	PRLR	P16471	622 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	SEC24C	P53992	1094 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	PDAP1	Q13442	181 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	ZNF567	Q8N184	647 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	STK32A	Q8WU08	396 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	AZIN2	Q96A70	460 aa		13.76	□□□□□ -0.21
DDR1-225	ENST00000376568	ZNF670	Q9BS34	389 aa		13.76	□□□□□ -0.21

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