RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DRC3Q9H069 523 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 ABHD16BQ9H3Z7 469 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 G3BP2Q9UN86 482 aaKnown RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 RUVBL2Q9Y230 463 aaKnown RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 IPPQ9Y573 584 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 CCDC78A2IDD5 438 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 HDAC3O15379 428 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 USP17L7P0C7H9 530 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 CD1EP15812 388 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 PIK3R1P27986 724 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 GRIA4P48058 902 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 NUMBP49757 651 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 PRPSAP1Q14558 356 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 SEL1L3Q68CR1 1132 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 MFN1Q8IWA4 741 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH5-201ENST00000375703 MAML3Q96JK9 1138 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 SCYL1Q96KG9 808 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 TEKT5Q96M29 485 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 VAT1Q99536 393 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 MCMBPQ9BTE3 642 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 WDCPQ9H6R7 721 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 PACSIN3Q9UKS6 424 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 H3BNX3 289 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 TK2O00142 265 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 PDHXO00330 501 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 GABRDO14764 452 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 AP1G2O75843 785 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
MSH5-201ENST00000375703 TFEBP19484 476 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 EPHA3P29320 983 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 NUDT2P50583 147 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 GALNT2Q10471 571 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 CDH17Q12864 832 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 USP10Q14694 798 aaKnown RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 LSM12Q3MHD2 195 aaKnown RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 MMEL1Q495T6 779 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 LIPMQ5VYY2 423 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ZYG11AQ6WRX3 759 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SLC10A4Q96EP9 437 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SERPINI1Q99574 410 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 OR12D3Q9UGF7 316 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ANKRD6Q9Y2G4 727 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SNX10Q9Y5X0 201 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 MBLAC1A4D2B0 266 aaPredicted RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 C9IYK1 514 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 PIGNO95427 931 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 CCR10P46092 362 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 PGGT1BP53609 377 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 NAGLUP54802 743 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 GJA9P57773 515 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ARL13AQ5H913 290 aaPredicted RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 MAP3K21Q5TCX8 1036 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SNX32Q86XE0 403 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ST13P4Q8IZP2 240 aaPredicted RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 TMEM151AQ8N4L1 468 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SMG8Q8ND04 991 aaKnown RBP14.8□□□□□ -0.04
MSH5-201ENST00000375703 RDH11Q8TC12 318 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 ZFAND2BQ8WV99 257 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 GPR22Q99680 433 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 SMOQ99835 787 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 TINF2Q9BSI4 451 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 TRIM4Q9C037 500 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 STK39Q9UEW8 545 aa14.8□□□□□ -0.04
MSH5-201ENST00000375703 CASQ2O14958 399 aaPredicted RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 PHGDHO43175 533 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 CABYRO75952 493 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 GLRBP48167 497 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 DLG1Q12959 904 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 GRAMD1BQ3KR37 738 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 NAPEPLDQ6IQ20 393 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 C16orf89Q6UX73 402 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 GPRIN1Q7Z2K8 1008 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 CTU1Q7Z7A3 348 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 ZC3HC1Q86WB0 502 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 KYQ8NBH2 561 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 ICA1LQ8NDH6 482 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 RP9Q8TA86 221 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 CNDP1Q96KN2 507 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 EPAS1Q99814 870 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 C1QTNF1Q9BXJ1 281 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 NUF2Q9BZD4 464 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 CNGB3Q9NQW8 809 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 NSMCE4AQ9NXX6 385 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 ZNF638Q14966 1978 aaKnown RBP14.79□□□□□ -0.04
MSH5-201ENST00000375703 AP3B1O00203 1094 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 TXNDC9O14530 226 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PEX1O43933 1283 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 F9P00740 461 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 SBK3P0C264 359 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 FAM163BP0C2L3 166 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 LRPAP1P30533 357 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 AVPR1AP37288 418 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 PRKAA2P54646 552 aa14.79□□□□□ -0.04
MSH5-201ENST00000375703 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms