RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 ARHGEF3Q9NR81 526 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 FBXL21Q9UKT6 434 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 HCN2Q9UL51 889 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 ZNF148Q9UQR1 794 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 DRG1Q9Y295 367 aaKnown RBP21.05■□□□□ 0.96
NELFE-202ENST00000375429 KCNK1O00180 336 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 MAN2B1O00754 1011 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 MATN3O15232 486 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 EGFP01133 1207 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 ATP5BP06576 529 aaKnown RBP21.04■□□□□ 0.96
NELFE-202ENST00000375429 COILP38432 576 aaPredicted RBP21.04■□□□□ 0.96
NELFE-202ENST00000375429 TNFRSF4P43489 277 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 STK19P49842 368 aaPredicted RBP21.04■□□□□ 0.96
NELFE-202ENST00000375429 PRKCQQ04759 706 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 EIF4HQ15056 248 aaKnown RBP21.04■□□□□ 0.96
NELFE-202ENST00000375429 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 RETSATQ6NUM9 610 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 NUDT18Q6ZVK8 323 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 CDKL3Q8IVW4 592 aaPredicted RBP21.04■□□□□ 0.96
NELFE-202ENST00000375429 HTR3CQ8WXA8 447 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 MAML1Q92585 1016 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 FATE1Q969F0 183 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 EXOC4Q96A65 974 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 MRGPRX3Q96LB0 322 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 L2HGDHQ9H9P8 463 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 SLCO3A1Q9UIG8 710 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 ERVW-1Q9UQF0 538 aa21.04■□□□□ 0.96
NELFE-202ENST00000375429 ZSCAN5CA6NGD5 496 aaPredicted RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 CCDC188H7C350 402 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 K7ERQ8 282 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 ASLP04424 464 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 ITGAVP06756 1048 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 DLDP09622 509 aaKnown RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 DRD1P21728 446 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 CLCN6P51797 869 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 NRLP54845 237 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 C2orf54Q08AI8 447 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 SLC10A7Q0GE19 358 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 GRSF1Q12849 480 aaKnown RBP eCLIP21.03■□□□□ 0.96
NELFE-202ENST00000375429 PTPRNQ16849 979 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 HEATR6Q6AI08 1181 aaKnown RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 UHRF1Q96T88 793 aaPredicted RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 RRAGDQ9NQL2 400 aaPredicted RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 UBA2Q9UBT2 640 aaPredicted RBP21.03■□□□□ 0.96
NELFE-202ENST00000375429 STARD13Q9Y3M8 1113 aa21.03■□□□□ 0.96
NELFE-202ENST00000375429 KCNN4O15554 427 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 CCNB1P14635 433 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 GDF10P55107 478 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 STARD6P59095 220 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 SLC20A2Q08357 652 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 HNRNPDQ14103 355 aaKnown RBP21.02■□□□□ 0.96
NELFE-202ENST00000375429 CYTH1Q15438 398 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 CCDC137Q6PK04 289 aaKnown RBP21.02■□□□□ 0.96
NELFE-202ENST00000375429 ZNF852Q6ZMS4 543 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 KLHL7Q8IXQ5 586 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 USP33Q8TEY7 942 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 MYO19Q96H55 970 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 ZNF419Q96HQ0 510 aaPredicted RBP21.02■□□□□ 0.96
NELFE-202ENST00000375429 ZNF599Q96NL3 588 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 SEPT10Q9P0V9 454 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 SLC25A13Q9UJS0 675 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 HS3ST2Q9Y278 367 aa21.02■□□□□ 0.96
NELFE-202ENST00000375429 CXorf51AA0A1B0GTR3 108 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 SMAD6O43541 496 aaKnown RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 JCHAINP01591 159 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 SRCP12931 536 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 CHRNA3P32297 505 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 KIR2DL1P43626 348 aaPredicted RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 SERPINH1P50454 418 aaKnown RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 IFI35P80217 286 aaPredicted RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 ZXDAP98168 799 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 WASHC5Q12768 1159 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 ZBTB17Q13105 803 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 LBRQ14739 615 aaKnown RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 KCTD19Q17RG1 926 aaPredicted RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 INO80DQ53TQ3 878 aaPredicted RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 TMCO4Q5TGY1 634 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 MARC1Q5VT66 337 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 SIX5Q8N196 739 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 SH2D3CQ8N5H7 860 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 TEX26Q8N6G2 289 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 FAM71DQ8N9W8 422 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 ATL2Q8NHH9 583 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 UCMAQ8WVF2 138 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 IL12RB2Q99665 862 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 CARD6Q9BX69 1037 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 CEP41Q9BYV8 373 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 ZDHHC4Q9NPG8 344 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 NDRG2Q9UN36 371 aaKnown RBP21.02■□□□□ 0.95
NELFE-202ENST00000375429 PLA2G4CQ9UP65 541 aa21.02■□□□□ 0.95
NELFE-202ENST00000375429 SGK1O00141 431 aa21.01■□□□□ 0.95
NELFE-202ENST00000375429 SRPRAP08240 638 aaKnown RBP21.01■□□□□ 0.95
NELFE-202ENST00000375429 STIP1P31948 543 aaKnown RBP21.01■□□□□ 0.95
NELFE-202ENST00000375429 FNTAP49354 379 aa21.01■□□□□ 0.95
NELFE-202ENST00000375429 RENBPP51606 427 aa21.01■□□□□ 0.95
NELFE-202ENST00000375429 SEC13P55735 322 aa21.01■□□□□ 0.95
NELFE-202ENST00000375429 GEMIN4P57678 1058 aaKnown RBP21.01■□□□□ 0.95
NELFE-202ENST00000375429 RFTN1Q14699 578 aaPredicted RBP21.01■□□□□ 0.95
NELFE-202ENST00000375429 EGFLAMQ63HQ2 1017 aa21.01■□□□□ 0.95
NELFE-202ENST00000375429 CCDC105Q8IYK2 499 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms