RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZCWPW2A0A1B0GU75 182 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KIAA0355O15063 1070 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 HMBSP08397 361 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TACR2P21452 398 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ADRA1AP35348 466 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RENBPP51606 427 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 WDR5P61964 334 aaKnown RBP18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 DEFB103AP81534 67 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 BMPR2Q13873 1038 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RAB33AQ14088 237 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PARP15Q460N3 678 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CERCAMQ5T4B2 595 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CGB2Q6NT52 195 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SPATA21Q7Z572 469 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TFAP2DQ7Z6R9 452 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 DDX53Q86TM3 631 aaKnown RBP18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RASSF3Q86WH2 238 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 GPR65Q8IYL9 337 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ACMSDQ8TDX5 336 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PLCD4Q9BRC7 762 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KIFC1Q9BW19 673 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MRPL42Q9Y6G3 142 aaKnown RBP18.33■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 C2CD2LO14523 706 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 YBEYP58557 167 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 BTG3Q14201 252 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ZKSCAN8Q15776 578 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 HECTD3Q5T447 861 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PRPF38BQ5VTL8 546 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TEX26Q8N6G2 289 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SPATA22Q8NHS9 363 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 AZIN2Q96A70 460 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PLD4Q96BZ4 506 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ZNF512Q96ME7 567 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RPRD1AQ96P16 312 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SRPK1Q96SB4 655 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CPNE1Q99829 537 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PITPNM3Q9BZ71 974 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLC25A51Q9H1U9 297 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SPG21Q9NZD8 308 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 UBP1Q9NZI7 540 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ZFATQ9P243 1243 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ACSL4O60488 711 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 EDF1O60869 148 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 BAIAP3O94812 1187 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 GP5P40197 560 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PPP3CCP48454 512 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IL10RBQ08334 325 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MPP3Q13368 585 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MROH9Q5TGP6 573 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 OTUD6BQ8N6M0 293 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PTCD2Q8WV60 388 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ZNF75CPQ92670 426 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PAWRQ96IZ0 340 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 APOL2Q9BQE5 337 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SP110Q9HB58 689 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TRPM5Q9NZQ8 1165 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PRKAG3Q9UGI9 489 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TRIM43BA6NCK2 446 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CCT8L1PA6NM43 557 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 F5H5T6 163 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RAMP2O60895 175 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MT-CYBP00156 380 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 URODP06132 367 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CSF2RAP15509 400 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ITGB8P26012 769 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CRHR1P34998 444 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ALDH1A3P47895 512 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KCNQ1P51787 676 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 GRTP1Q5TC63 336 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 DENND5AQ6IQ26 1287 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CES3Q6UWW8 571 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CCDC121Q6ZUS5 278 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CCT6BQ92526 530 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IMP4Q96G21 291 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IQCGQ9H095 443 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KDM4CQ9H3R0 1056 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CYP4F11Q9HBI6 524 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MRM3Q9HC36 420 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLC17A6Q9P2U8 582 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ARL2BPQ9Y2Y0 163 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PLLPQ9Y342 182 aa18.31■□□□□ 0.52
HLA-DQB1-201ENST00000374943 COCHO43405 550 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ATP9BO43861 1147 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NEBLO76041 1014 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ERVK-10P10266 1014 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PPM1AP35813 382 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SERINC3Q13530 473 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 LACTB2Q53H82 288 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FAM133BQ5BKY9 247 aaKnown RBP18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PCID2Q5JVF3 399 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MARC1Q5VT66 337 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 POTEHQ6S545 545 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms