RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CBR4Q8N4T8 237 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 APBA2Q99767 749 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PDZD7Q9H5P4 517 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 ZBTB26Q9HCK0 441 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 AGO4Q9HCK5 861 aaKnown RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 TMEM9Q9P0T7 183 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 ARHGAP28Q9P2N2 729 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 SUCOQ9UBS9 1254 aaKnown RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PCDHGC3Q9UN70 934 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PCDHGA7Q9Y5G6 932 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PSME4Q14997 1843 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PROZP22891 400 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 TYK2P29597 1187 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 CCR10P46092 362 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 YAP1P46937 504 aaKnown RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 TPTEP56180 551 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 MERTKQ12866 999 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 AGAP7PQ5VUJ5 663 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 PLD6Q8N2A8 252 aaKnown RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 ANKFN1Q8N957 763 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 DEFB129Q9H1M3 183 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 DNMT3BQ9UBC3 853 aaKnown RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 MIPP30301 263 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 PTGER2P43116 358 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 IFITM2Q01629 132 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 DMP1Q13316 513 aaPredicted RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 MTMR1Q13613 665 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 UGCGQ16739 394 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 INSCQ1MX18 579 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 CPXCR1Q8N123 301 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 FBXL20Q96IG2 436 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 OSBPL10Q9BXB5 764 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 SMARCAD1Q9H4L7 1026 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 IFT52Q9Y366 437 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 TCAF1Q9Y4C2 921 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 TCRBV3S1A0A5B6 114 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 POLR2BP30876 1174 aaKnown RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 POLR2IP36954 125 aaKnown RBP20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 ACOT2P49753 483 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 CRADDP78560 199 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 CMC1Q7Z7K0 106 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 OFCC1Q8IZS5 231 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF347Q96SE7 839 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 VRTNQ9H8Y1 702 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 RSAD1Q9HA92 442 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 ANKMY1Q9P2S6 941 aa20.91■□□□□ 0.94
TMEFF1-201ENST00000374879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 PSMD11O00231 422 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 GMNNO75496 209 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 S100BP04271 92 aaPredicted RBP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 CLDN10P78369 228 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 DNASE1L3Q13609 305 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 FAM209AQ5JX71 171 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 TREML2Q5T2D2 321 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 DSG4Q86SJ6 1040 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 CLEC4DQ8WXI8 215 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 ILKAPQ9H0C8 392 aaPredicted RBP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 CYP26B1Q9NR63 512 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 WDR27A2RRH5 827 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF839A8K0R7 811 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 HDAC3O15379 428 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 IL18RAPO95256 599 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 METTL18O95568 372 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 LIG4P49917 911 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 HNRNPFP52597 415 aaKnown RBP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF132P52740 706 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 NIPAL4Q0D2K0 466 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 HERC3Q15034 1050 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 INAVAQ3KP66 663 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 XKR9Q5GH70 373 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 SEL1L3Q68CR1 1132 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 MFSD2AQ8NA29 543 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 MCUQ8NE86 351 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 CYGBQ8WWM9 190 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 SH3YL1Q96HL8 342 aaPredicted RBP20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 CSF3RQ99062 836 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 TCF12Q99081 682 aa20.9■□□□□ 0.94
TMEFF1-201ENST00000374879 TANC1Q9C0D5 1861 aa20.89■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF541Q9H0D2 1346 aa20.89■□□□□ 0.94
TMEFF1-201ENST00000374879 KCNU1A8MYU2 1149 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 G3V2L1 256 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 LSM8O95777 96 aaKnown RBP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 BMP2P12643 396 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 YBX3P16989 372 aaKnown RBP eCLIP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 MZF1P28698 734 aaPredicted RBP20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 MAGEA6P43360 314 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 CDH6P55285 790 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 ADAM17P78536 824 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 IFITM3Q01628 133 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 SLC36A3Q495N2 470 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 NIPA1Q7RTP0 329 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 CNTD1Q8N815 330 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 ABHD11Q8NFV4 315 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 OR13F1Q8NGS4 319 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 A0A1W2PQ67 120 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 PRORSD1PA6NEY8 169 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 SLC22A2O15244 555 aa20.89■□□□□ 0.93
TMEFF1-201ENST00000374879 PAPSS1O43252 624 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms